| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1035 |
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| Symbol | aksA |
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| ID | 6027223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 1085302 |
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| End bp | 1086462 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641593847 |
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| Product | trans-homoaconitate synthase |
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| Protein accession | YP_001717179 |
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| Protein GI | 169831197 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02660] homocitrate synthase NifV |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.875019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAGC AGGAGCGTAA AATCTTCGTT GTGGATACCA CGCTGCGGGA CGGGGAGCAA
ACGGCGGGCG TGGTGTTTGC CAACCACGAA AAGGTGCGGA TCGCCAAGCT CCTGGACGAG
TTAGGAGTAC ACCAGATCGA GGCCGGTATT CCGGTGATGG GTGGTGACGA GGAGAAGGCG
ATCCGGAAAA TCTGCGGCCT GGGCCTGAAG GCCAGCATTA TGGGTTGGAA CCGGCCGGTG
ATCAAAGATA TCGAGCACTC CCTGGCCTGC GGGGTGGACG CCGTGGCCAT CTCCATCTCC
ACTTCGGACA TCCATATCAA GCACAAACTG CAAGCCAGCC GGGAGTGGGT CCTGGAGCAG
ATGGTTAACG CGACCCGGTT TGCCAAGGAA CAAGGGGTGT ACATTTCGGT GAACGCCGAA
GACGCGTCCC GGAGCGACCC CGACTTTCTG GTGGAGTTCG CGAAGGCCGC TCAGGAGGCC
GGGGCCGACC GCCTGCGGTA CTGCGACACG GTGGGTATCC TGGAACCCTT CGTCACTTAT
AACAACATCA AGTACATCCG GGAGCGGGTG GACCTGGATA TTGAGATGCA CACGCACGAC
GACTTCGGCA TGGCCACCGC CAACGCCCTG GCAGGCGTGC TGGCCGGTGC CAACTACGTC
GGGGTCACGG TATTAGGACT GGGAGAGCGT GCCGGAAACG CGGCTCTGGA GGAGGTCGTC
ATGGCCCTGA AATACCTCCA TAACATCGAC CTGAACTTCA ACACCGAGAT GTTCCGGGAG
GTGGCCGAAT ACGTGTCCCG CGCGTCCGGG CGCGAACTGC CCGCCTGGAA GGCCATCGTC
GGGTCGAACA TGTTCCGCCA TGAATCAGGC ATCCACGCCG ACGGCGCGTT GAAGTTCCCC
GGGACCTACG AGGCCTTCAC CCCGGAAGAG GTGGGCCTGC AGCGGCAGAT CGTGATCGGC
AAGCATTCCG GTACGGCCGC CGTGCGCGCC AAGTTCGCGG AGTACGGTAT CGAGCTCACC
CGGCACCAGG CGCAGGAATT GCTTCCGGTA ATCAGGGCCC TGGCCGTGTC GCTCAAACGC
TCACTATTTG ACAAGGAACT GGTATACATT TTCGAAGATC ATTTCGGAAA GAGGAGCAAG
CATGGGTCTG AACATCATTG A
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| Protein sequence | MEQQERKIFV VDTTLRDGEQ TAGVVFANHE KVRIAKLLDE LGVHQIEAGI PVMGGDEEKA
IRKICGLGLK ASIMGWNRPV IKDIEHSLAC GVDAVAISIS TSDIHIKHKL QASREWVLEQ
MVNATRFAKE QGVYISVNAE DASRSDPDFL VEFAKAAQEA GADRLRYCDT VGILEPFVTY
NNIKYIRERV DLDIEMHTHD DFGMATANAL AGVLAGANYV GVTVLGLGER AGNAALEEVV
MALKYLHNID LNFNTEMFRE VAEYVSRASG RELPAWKAIV GSNMFRHESG IHADGALKFP
GTYEAFTPEE VGLQRQIVIG KHSGTAAVRA KFAEYGIELT RHQAQELLPV IRALAVSLKR
SLFDKELVYI FEDHFGKRSK HGSEHH
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