Gene Daud_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1020 
Symbol 
ID6027472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1070157 
End bp1070573 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content56% 
IMG OID641593832 
ProductNusB antitermination factor 
Protein accessionYP_001717164 
Protein GI169831182 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000376334 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGAGAA GACGTCAGAG AGAGACCGCC CTGCAGGTTC TTTTTCAGGC TGAAGTCGCC 
CGCATTTCCG GAGAACGTGC CTTTGCGCGG ACCATGGAGT TGTTCGGCCT GAATACCGAG
GATTTTGCTT ACGCCCAAGA ACTGGTGGAC GGCGTTTTGG CGAAGGTGGA CCGGCTCGAC
AGAATAATCT CCCGGGTGAG TCACGAATGG CGCCTGGAAC GAATGGCCAA CGTAGACCGG
AATATTATCC GGCTGGCGCT CTACGAAGTG TTCTTCCGTG ACGACATCCC GATCAACGTG
GCGGTGAACG AGGCGCTTGA GTTGGCCAGG ACGTTCGGAA CTGAGGACTC GCGGCGGTTT
GTGAATGGGA TTCTGGGCAA AGTGGTGGAA GAGCCGGAGG AATATCGTCC GGAATAG
 
Protein sequence
MKRRRQRETA LQVLFQAEVA RISGERAFAR TMELFGLNTE DFAYAQELVD GVLAKVDRLD 
RIISRVSHEW RLERMANVDR NIIRLALYEV FFRDDIPINV AVNEALELAR TFGTEDSRRF
VNGILGKVVE EPEEYRPE