| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0991 |
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| Symbol | |
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| ID | 6026308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 1045544 |
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| End bp | 1047238 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641593803 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001717135 |
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| Protein GI | 169831153 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGAACGG AGACTTCCCG GAAACTCCTC GGGGAAATCC TGCTTGAGAA GCGGGTGATC
ACCGCCGAGG CCTTGCAGGA AGCCCTGGAT CTTCAAAAAC AAACCGGGGA GCGCCTGGGC
CGGGTGCTGG TGGACCTGGG ATATGTGAGC GAGCATGTCC TGGTCGAGGC GCTCGCCGGT
CAACTGGGGA TCCGGTACGT ACACCTGGAC GGCCTGGCGC TCGACCCGGA GCTTGTCCGT
AGTGTTCCGG AAAAGCTCAT CCGGCGCCAC AAGGCGGTAC CGCTGCGCCG GGACGGGAGT
CGGCTGCGGG TGGCGATGTC GGACCCCCTG AACGTAACCG CCGTCGACGA CCTCCGCCTG
GTTTCAGGTT GCGAAATCGA TCCGGTGCTG GCGCTGGAAT CCGAGTTGGA TCTGGTCATC
AGAAAGCACC TGGGGTTCCC CGACCTTGAA GAGACCGCCG GTGTGTTTGA CGACGTCGAG
GTGGTGCGCT CCGAAGTGGT CAGCCTCAAT CCCGGGGAGC CGATGGATGA CGAGGCGCCT
GTGGTCCGGG TGGTCAATTC GATGATTATG CAGGCGATTC GCGACGGGGC CAGCGACATG
CACGTGGAGC ATCTTGAAGA GCAGGTCCGG ATACGGTGCC GGGTCGACGG CCTGCTGCGC
GACCTTACCG TTCTGCCGCC GAAGTTCCGC TACCCGCTGG TTTCACGCCT GAAGATAATG
GCCCGGCTGG ACATTGCCGA GAAACGCGTG CCGCAGGACG GCCGCTTCCA GGTACGGTAC
CGCGGCCGGG AAATCGACTT TCGGGTGTCC ACAATGCCGA CGGTGTTCGG TGAGAAGGTG
GTCATCCGGA TCCTGGACAA GACCAGGATG ATCAACCGAG TGGATAAACT GGGCTTTTCC
GCCGCGAACC GGCAGCGTCT TACCGGGATA CTCCGCCACC CGTACGGAAT GGTGCTCATC
ACCGGGCCCA CCGGAAGCGG AAAGACCACC ACCTTGTACG CCATCCTGAG TGAACTGAAC
TCCCCCGCGC TCAACGTAAT CACGATCGAG GATCCGGTTG AGTATATTTT GCCAGGGGTC
AACCAGATCC CGATCAACCC CCGGGCCGGG CTGACTTTTT CCCGCGGACT GCGCTCCATT
TTGCGCCAGG ATCCCGACAT CATCATGGTG GGGGAAATCA GGGACGCGGA AACGGCGGAG
ATCGCGGTGC GCGCGGCTAC CACTGGGCAC CTTGTTTTTT CTACCCTGCA CACCAACAAC
GCGGTTGGCG CCCTGTCCCG CCTGGTGGAC ATCGGCATAG AGCCTTTCCT GGTCGCTTCC
AGCGTGCTGG GTGTGGTGGC GCAGCGGCTG GTGCGGGTGA TCTGCCCGCG CTGCCGTGAG
AGTTACCACC CGGCCCCGGG CGGCCTGGAG CGGTATTTTG CGGGACAGGG TCCTGATGAA
ACGGTCACCC TCCACCGGGG GATGGGTTGC ACCCATTGCG GCCGAACGGG CTACCGCGGC
CGAACCACCA TCGGCGAAGT ATTGCCCCTG TCGGCCGTTC TCCGGCAGAT GGTGTGCGCC
CGGGCCGGCG AGGGAGAGCT GGAAAGCCAG GCCGTCCGGG AGGGGTTCAT CCTGATGAAG
GATGACGGTC TGGAGAAGGT GCGCCGGGGA ATCACCACCG TCAGCGAAAT CATGCGGGTG
GCCTACGTCG ACTAG
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| Protein sequence | MRTETSRKLL GEILLEKRVI TAEALQEALD LQKQTGERLG RVLVDLGYVS EHVLVEALAG
QLGIRYVHLD GLALDPELVR SVPEKLIRRH KAVPLRRDGS RLRVAMSDPL NVTAVDDLRL
VSGCEIDPVL ALESELDLVI RKHLGFPDLE ETAGVFDDVE VVRSEVVSLN PGEPMDDEAP
VVRVVNSMIM QAIRDGASDM HVEHLEEQVR IRCRVDGLLR DLTVLPPKFR YPLVSRLKIM
ARLDIAEKRV PQDGRFQVRY RGREIDFRVS TMPTVFGEKV VIRILDKTRM INRVDKLGFS
AANRQRLTGI LRHPYGMVLI TGPTGSGKTT TLYAILSELN SPALNVITIE DPVEYILPGV
NQIPINPRAG LTFSRGLRSI LRQDPDIIMV GEIRDAETAE IAVRAATTGH LVFSTLHTNN
AVGALSRLVD IGIEPFLVAS SVLGVVAQRL VRVICPRCRE SYHPAPGGLE RYFAGQGPDE
TVTLHRGMGC THCGRTGYRG RTTIGEVLPL SAVLRQMVCA RAGEGELESQ AVREGFILMK
DDGLEKVRRG ITTVSEIMRV AYVD
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