Gene Daud_0989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0989 
Symbol 
ID6026538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand+ 
Start bp1043921 
End bp1044490 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content63% 
IMG OID641593801 
Productshikimate kinase 
Protein accessionYP_001717133 
Protein GI169831151 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.764928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGCAACG TGATCCTGAT CGGCTTCATG GGCACCGGCA AAAGCGCGGT GGGGTGGCGC 
TTGGCCCGGA TCCTGGACCG TCCTTTTCTG GACACCGACT CCGAAATCGA GCGGCTGGCC 
GGCAAGCCGG TGCGCCGGAT TTTCATTGAA GACGGAGAAG TACGGTTTCG CTCGGAGGAG 
GCGCTCCTGT GCCGGAAGCT GGCCGTGCCG CGGGGATTGG TGGTGGCCAC TGGCGGCGGC 
GTGGTACTGA ACCCGGAGAA TGTGGCTAAC CTTCGGGCCG GCGGCGTGCT GATCGGTCTT 
TCGGCCGACC CCGAGGTGAT TTACCAGCGG GTCAGGCGAA AAAAAAGCCG CCCCTTGCTC 
CGGGGCAATG TTCGGGCACG CATCCGGGAG CTCCTCGAGG AACGAGCGGG GGCGTATGAC 
GTCGCCGAAT TCACGGTGGA CACGGGGATG CACAGCCTGC CGAAAACGGT GGGGTTGATT 
ATGGAGTTCT TGAAGGAGCG GGGGTACCTT GAGGCGGGAA GTGACAGTGA ATCTGGGGGC 
GTCCCGGAGT TACCCGATAT TTCTCGGTGA
 
Protein sequence
MRNVILIGFM GTGKSAVGWR LARILDRPFL DTDSEIERLA GKPVRRIFIE DGEVRFRSEE 
ALLCRKLAVP RGLVVATGGG VVLNPENVAN LRAGGVLIGL SADPEVIYQR VRRKKSRPLL 
RGNVRARIRE LLEERAGAYD VAEFTVDTGM HSLPKTVGLI MEFLKERGYL EAGSDSESGG 
VPELPDISR