| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0962 |
|---|
| Symbol | |
|---|
| ID | 6027561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1021045 |
|---|
| End bp | 1021401 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641593774 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001717106 |
|---|
| Protein GI | 169831124 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000546068 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGGAA AAAGCCGGTT TCCATCAACG CACAGGGGTT TTTCCCTGGT CGAGATAATC
GTTGCCGTGG CCTTACTGGC TATCTTTATT GCGGCGGCCG CTGTCCTTTT GAGCGCGAGC
TTTAAAGGCA TAATGGACAG TGGTGAGAAA AGTAGGCTTA TTTATCATAC CCAGCAAGTC
TTGGAAGAGA AAATAAGCCG AAATGACGTT GCTAGAAAGG CCGATTTTGA AATTTCGTTC
TCAACCCGCA CCGGAGACAA TTATCTGATG CGGATAGATG ACGCCGGCAT TGTTGAGGAA
GGTTCTTTGG TTTGTATTAC TATGGCCACA AATATTTACA ACGCCGAGGC CGAATAG
|
|---|
| Protein sequence | MRGKSRFPST HRGFSLVEII VAVALLAIFI AAAAVLLSAS FKGIMDSGEK SRLIYHTQQV
LEEKISRNDV ARKADFEISF STRTGDNYLM RIDDAGIVEE GSLVCITMAT NIYNAEAE
|
|---|
| |