| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0961 |
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| Symbol | |
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| ID | 6027513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 1019345 |
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| End bp | 1020997 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641593773 |
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| Product | hypothetical protein |
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| Protein accession | YP_001717105 |
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| Protein GI | 169831123 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.209127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGAGCC GGGGAGGGCA AAACATGTTT GAGCGCGGCC CCGGGAACAA CAAGGGATTG
ACCTTGGTGG AGCTGCTGGT CGGGGCGGCC CTTTTGGGCG CGGTACTGGC AATAGGTTAC
ACCTTTTTTT ATTTCGGCCA CCAATCTTTT ACCGCGGGGG AACAGCGCTC CTGGGTGCGG
CAGAATATTC GCCTGGCAGC CGACTTTATT ACCCAAGAGC TAAGGTATGC CACCCACGTA
TATGTGCTCG GTTCCGTCCC CCAATCGTTT GCCGCGGACC TCAACTATAT TTACGTTAAG
GATGGTGTCC TCAAGCACCG GAAAGCAGGC GGCGGCGAAG ATACGGTCTT TGACCGCATC
TCGGAGGGGG TCGTGCTGAA GGAGGATCTT GGTTTTTCCC TGGACGGGGA GTTTTTGGCT
TATCGCGTCG CCAACAGCGG TGAAGATGCT TACGCCATAG ACGGCAGGAT TCGGCTTCTG
AATCCCCTGG CCGATTCAAG CGGTAAAGAC GGAGTGGCTG TTGCCTACAA AAGTGAGCGG
CCAGCGGAAA CACCTCCGGA ACGATATACG CTAACGGTCT CGGTAGCAGA AGGCAATGGT
ACCACATCCC CGGAGGCGGG CGACCACGTT TATGAAAAGA ATACCACGGT GCCTTTGACG
GCTTTTCCGG CGGACGGATG GGTATTCAAG AAGTGGCTCA TCAATGGAGT CAATATCACT
ACGGCCACCA CCACGATCGT CATGAACAAA GACATAGAAG CAAGGGCCTA CTTTGTGGAT
AAATATGATT TTTATGACTT TTTGCAGGAT CAGAACGTGT TTGTGTATGG AGGCCGCTTG
GTTTTTGAAG GCGAAAAAGT TGAAGGACGA AACGCCACCA TTGTAATCAA GGGGAACTTG
GGGGAAGATG ATTTGAACAA GGGTTCTCAT ATCGACGTTA AAACAATTTA TATAGACGGC
TCTGTAGATT TGGATGGAGG GAGCGCCGAT TTAGGCGCGG CCGATAACAC CGGTTCCATT
TATATTAACG GCGACTTGAC TTTATGGAAA GGGAAGCGTG ATGTTTACGG CAACGTCTAC
GTCGCCGGCA ATCTGCGCTT GAAGGACGCG GTAATCCACG GCAATATTTA TGTCAATGGG
AATGTGGAAC TGGGTTGGAC ACCCGACCTC AAGCCCAATG CGCGCATTTA CTATACGGGT
ACTCTAACCC ATCCCAAACG CATGAGCCCT GGCATCATTT CAAAATGCAT CAAGGTGGAC
AGCGTTCCGG GCTTTGTGGT GCCTGATTTT GGCTTTCCTG CTTTAAAACC GGACGCCTGG
TATGCCGCCA ACGGATATGT ATCCGGGGGA GCCCTGACAA GTGGAATTAA AATTTATGCC
GATAATTATT CGTCGACCGC CTGGCGGCCG ACCGCGCACA ACGTGGTCAT CGTCAGCAAG
GGAGATATCA CCATCACTAG GCTTGGAGGC AGCGGGGTCA GCGGGGTATT ATACGCGCCG
AACGGAAGAG TGACCTTTGA GGGAGAGTTC TTCGAGGGAG TGGTGATCGC CAGAGACGGC
TTTTTTGTTA CGCGCGGCGG GACCACCGTC ACTTTCAAGC ATATAAACAC TTTCTTCAGC
TCGGTCGCCG ACTATCCATT TTTGAGTGAA TAG
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| Protein sequence | MWSRGGQNMF ERGPGNNKGL TLVELLVGAA LLGAVLAIGY TFFYFGHQSF TAGEQRSWVR
QNIRLAADFI TQELRYATHV YVLGSVPQSF AADLNYIYVK DGVLKHRKAG GGEDTVFDRI
SEGVVLKEDL GFSLDGEFLA YRVANSGEDA YAIDGRIRLL NPLADSSGKD GVAVAYKSER
PAETPPERYT LTVSVAEGNG TTSPEAGDHV YEKNTTVPLT AFPADGWVFK KWLINGVNIT
TATTTIVMNK DIEARAYFVD KYDFYDFLQD QNVFVYGGRL VFEGEKVEGR NATIVIKGNL
GEDDLNKGSH IDVKTIYIDG SVDLDGGSAD LGAADNTGSI YINGDLTLWK GKRDVYGNVY
VAGNLRLKDA VIHGNIYVNG NVELGWTPDL KPNARIYYTG TLTHPKRMSP GIISKCIKVD
SVPGFVVPDF GFPALKPDAW YAANGYVSGG ALTSGIKIYA DNYSSTAWRP TAHNVVIVSK
GDITITRLGG SGVSGVLYAP NGRVTFEGEF FEGVVIARDG FFVTRGGTTV TFKHINTFFS
SVADYPFLSE
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