Gene Daud_0954 details

Gene Information

• Locus tag: Daud_0954
• ID: 6027151
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: +
• Start bp: 1013265
• End bp: 1013867
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 641593767
• Product: fimbrial assembly family protein
• Protein accession: YP_001717099
• Protein GI: 169831117
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3166] Tfp pilus assembly protein PilN

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAATAAGA TCAACATCAG CCTTTTACCT CCGGAAATAC GGAACCGGCA GCGGGCACGC 
CGCAGAACCG ATTATTATCT CCTGGCCGTC AGCGTGGTAA TGCTGTTTTT CTTGGGAGTC 
TACCTCGTGT TTCTGGGCAT CACTTTTCAA GTGCGTGCGG AAGTGAATGC TCTGCGGAAG 
GAACGGGCGG CGCTCCAGGA GGAGATCGCC GCCTACCAGG AATACGCAAC GCTTGAGGAA 
CAGGCCAAGG AGGCATCCAG GATGCTGGGG GACGCCATGG GCACCACCCC GGACTGGGCC 
TCCCTTTTGG CCGATTTGAG CCTGCACCTG CCCGAAGGGG TCTGGCTCGA AAGCCTTTCG 
GCTTCCTATC AGAACACGGG CGGCGCTTCC AAGCAGGGGG GCGGTGAATT GACTTTCAGA 
GGCTGGGCAA TCTCCCGGGC GGTCGTGGAC GGTCGCCTGG ATGAGTTTGG CGCGGTGCCG 
GGGCTGGCGG AGGCGCGCTG CCGGTTGACA ACGGTGGAAA GCACCCGGCT CGGCCTCGAG 
TTCACAGCCC GGATCCTGCC GGGCGACCCC TACCAGCCGG CCTTTCGGGG GGATGCCCGG 
TGA 

 

Protein sequence

MNKINISLLP PEIRNRQRAR RRTDYYLLAV SVVMLFFLGV YLVFLGITFQ VRAEVNALRK 
ERAALQEEIA AYQEYATLEE QAKEASRMLG DAMGTTPDWA SLLADLSLHL PEGVWLESLS 
ASYQNTGGAS KQGGGELTFR GWAISRAVVD GRLDEFGAVP GLAEARCRLT TVESTRLGLE 
FTARILPGDP YQPAFRGDAR