Gene Daud_0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0953 
Symbol 
ID6027143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand+ 
Start bp1012231 
End bp1013268 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content68% 
IMG OID641593766 
Producttype IV pilus assembly protein PilM 
Protein accessionYP_001717098 
Protein GI169831116 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4972] Tfp pilus assembly protein, ATPase PilM 
TIGRFAM ID[TIGR01175] type IV pilus assembly protein PilM 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTTAT TAGGTTCAGG TGGAGCCGTC GGCCTGGAAC TGGACACGGT TGAAGCTCGG 
GCGGTGGAAC TGCGGGGCAA GGCCGGTGCG GCCGGCGCGG CCACCTTGAC GGCTTGGGGC 
CGGGTGAGTC TCCCCCCGGG CGCCGTTGTC GACGGGATGG TGTCCCAACC GGAGCTGGTG 
GGGAAGGCCC TAGCCGAACT GTGGTCCGCC GGCCGGATCA CCAGCCGCGA GGTAGTACTC 
GGCGTGGTAA ACCGGGAAGT CCTGGTGCGC TTCGCCGTCG TGCCGGTGAT GCCCCGGACC 
AAGCTTTTTG GTGTCATCCG CCATCACGCC CGGGATCTCC TGCCGATTCC CCTGGACACG 
GCGGTCTGGG ACTATACGGT GATCGGTGAG CGGCCGGGCT TGGAGAGCCG GATGTTCGAA 
CTGCTGCTCG TGGCCGCGCG GCGGGAAATG CTGGACGGCT TTTTGCTGGC GCTGGCCTTC 
GCCCGTCTGG AGCCGCGGGA CATCGACGTG GCCTCCCTGG CTCTGCTGCG GGTCATGCCG 
CCGTCCCCGG CGGACGGCGC GGTCGTGCTG GTGGACCTGG GCAACGGATC AAGCACTGTT 
CTGGTCATCG CACGGGGCAT GCTGCGGTTG GCCCGCTTTG TTTCGGTCAG CCTGGAGGCG 
GCCGCCGGCA TGCTGGGATG TTCCGTAGAG GAGGCCTTGG CCGGGCCGGG CGGTACCGCG 
CACAGGCAAT GGCCGGCCGA GACCCTGGCC GCCTGGGCTG GCGGCGTGGA GGCCGAGATC 
CGCGCCTCCG TGGACTATTA CCAGCGGCAG GAGCCGGAGC CGGAGGCCGT ATCGGAAGTC 
GTCCTCAGCG GCCGGGGAGT CCGGGTACCG GGCCTGACCA CCCAACTGGA GGGCAATCTG 
GGAGTGCCGG TCAGGATCAT CGAGCCCCTG CAGGGGATTA CCTTGCCGGC GGGAATAGCC 
GAGAACAGCT CCTGGTCGGC TCCCGATTTC GCGACCTGTA TCGGGCTGGC GCGACGCGGA 
TTGGAGGGGG GACGTTGA
 
Protein sequence
MGLLGSGGAV GLELDTVEAR AVELRGKAGA AGAATLTAWG RVSLPPGAVV DGMVSQPELV 
GKALAELWSA GRITSREVVL GVVNREVLVR FAVVPVMPRT KLFGVIRHHA RDLLPIPLDT 
AVWDYTVIGE RPGLESRMFE LLLVAARREM LDGFLLALAF ARLEPRDIDV ASLALLRVMP 
PSPADGAVVL VDLGNGSSTV LVIARGMLRL ARFVSVSLEA AAGMLGCSVE EALAGPGGTA 
HRQWPAETLA AWAGGVEAEI RASVDYYQRQ EPEPEAVSEV VLSGRGVRVP GLTTQLEGNL 
GVPVRIIEPL QGITLPAGIA ENSSWSAPDF ATCIGLARRG LEGGR