Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0950 |
Symbol | |
ID | 6026475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 1008250 |
End bp | 1009578 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641593763 |
Product | integrase catalytic subunit |
Protein accession | YP_001717095 |
Protein GI | 169831113 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01586] cysteine protease domain, YopT-type |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAACCCA AGGAAGCCAG GAGACTAGGT ATTATGGAAC GGGTCCTTGC AGGCAAGGTA TCCATTCGGC AGGCTGCCGT CCTCCTTGGT CTCAGCGAAC GTCAGGTTAT GCGCCTCAAG AAAGGAATGA AACAGGAGGG TGAGGCTTTC CTCGTCCACA AAAACCGAGG CCGTAAACCA AAACACGCTA TAACCCACGA CGTCCGGGAC CGGATCATCA GCCTCGCCTC AGAAGAACTC AAGGACGCAA GTTGCGAGCA TATGGCTGAG CTGCTTGAGG AACTATATGA AATTTCGATC TCGGGCCGCA GCTTGCGTCG CATATTCAAG CAGGCCGGTA TCAAGAATCG GCACAGCCGC CGAGCCAAGC GGCGGAAACG GCGCTCCCGC AAGCGCATGC CTCAAGAAGG GCTTTTGGTC CAAAGCGACG CCAGCCCGTA CGCCTGGTTT GAAGATCGTG GCCCCAAGGC CTGCCTCCAC GGTAATATTG ATGACGCCAC CGGTAAGATC CTGGCACTTT GGTTCCGGCC CGAAGAGGAT CTGTACGGTT ACTTGATGGT CTTAAACCTA ACGGTCATAA ATCACGGAAT CCCGGTGAGC CTCTATACGG ACGGCCACTC CATCTTCTTC TCACCGAAGA AGGACAAGTT GTCCATTGAT GAGGAGCTGG CCGGCAAAAC CGTTGCCCTG ACCCAGTTCG GTAAGGCCCT GGAGGAATTG GGAATCAATC ATATTCAGGC ACGCTCTCCC CAAGCCAAAG GGCGTATAGA ACGTTTGTGG GAAACCCTGC AGAGCCGTCT GGTGATAGAG ATGCGCCTGC GAGGGATCTC CAACATTGAA GACGCGAACG CCTTTCTCCC GGTCTTTATT GAGCGCTTCA ACGCCCGCTT CGCCGTTTGG GCCGCCGATC CGGAACCGGC CTTTAAACCC GCACCCACCA GTGAACGGCT CAACGAGATT ATTGCCTTTC GGGAAGAGCG TACGGCTTCC AATGGTTCCA CGATCTCGTT TCACTGTAAG ACTTACCAGC TTATCGATGT CAAAGATCAA GCAGTTAGCC TGGCGCCCAG GGCGAAGGTT ACGGTCCTTA CTCATCTGGA CGGGACGATA AGCGCCAAGT ATGGCGATAA GGTGTTTTCG CTAAGGGAGT TCGTTCCCCA GCCGGCACCT AAGGCGGAGA TCCGTCAAGC CAAGCCCCGC CGGGAACCTG CTCCGGTGAC TGCGGATCAT CCCTGGCGCC AGATTTCTCC CATAGCGCCC AAGCCTTCAA CACCAGTGGA AGCGTACCTG GAAGCCAAGA GAAAGCGCTT CCGCAAGTAC GCCTTTTAA
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Protein sequence | MKPKEARRLG IMERVLAGKV SIRQAAVLLG LSERQVMRLK KGMKQEGEAF LVHKNRGRKP KHAITHDVRD RIISLASEEL KDASCEHMAE LLEELYEISI SGRSLRRIFK QAGIKNRHSR RAKRRKRRSR KRMPQEGLLV QSDASPYAWF EDRGPKACLH GNIDDATGKI LALWFRPEED LYGYLMVLNL TVINHGIPVS LYTDGHSIFF SPKKDKLSID EELAGKTVAL TQFGKALEEL GINHIQARSP QAKGRIERLW ETLQSRLVIE MRLRGISNIE DANAFLPVFI ERFNARFAVW AADPEPAFKP APTSERLNEI IAFREERTAS NGSTISFHCK TYQLIDVKDQ AVSLAPRAKV TVLTHLDGTI SAKYGDKVFS LREFVPQPAP KAEIRQAKPR REPAPVTADH PWRQISPIAP KPSTPVEAYL EAKRKRFRKY AF
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