| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0911 |
|---|
| Symbol | |
|---|
| ID | 6026042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 971636 |
|---|
| End bp | 972853 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641593723 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001717056 |
|---|
| Protein GI | 169831074 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1900] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00849288 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTGTCAGG TGAGCACTAA AACCTACGCC GAAATCAACG CCCGGCTCCG TGAAGGAAAG
GCGGTGGTCG TCACCGCGGA AGAGGTGGTG TCCATGGTCC GGGAACAGGG CCTCACCAAA
ACGGCCCGCC GGGTGGACGT GGTGACCACG GGTACTTTCG CACCGATGTG TTCCTCCGGA
GTATACTTGA ATTTCGGCCA CAGCGCCCCG CGCATCAAGG GGCACCGGGT ATTCTTGAAC
GACGTGCCGG CCTGCGGCGG TCTCGCGGCG GTGGACACTT TCCTGGGAGC GACTTCCGTC
CCGGAAACCG ACCCCTTGAA CCGGAACCAC CCCGGCGAGT TCCGGTACGG AGGGGGTCAC
GTCATTCACG ACCTGGTAGC CGGCAATCCG GTCAAGCTGA AGGTGGAGGG TTACGGCACC
GACTGCTATC CCCGGCGCGA GATCGAGACC TGGATCACCC TGGACGACCT GAACGAGGTC
GTGCTTTTCA ACCCGCGTAA CGCTTATCAG AACTACAACG TGGCGGTGAA CCTGGGCCCC
AGGACGCTTT ATACCTATAT GGGAGTCTTG AAACCCGACC TGGGCAACGC TCACTATTCG
ACCAGCGGAC AATTGAGTCC GCTTCTGAAG GACCCATATT TCCGGACCAT TGGCATCGGC
ACCCGGATCT TCCTGGGCGG AGGCACCGGC TACGTGGTCT GGAACGGCAC CCAGCACTTC
CCCGCCGTGC GGGAAGGCCC GGTGGAGGGT TCGGTGTTCG CGGCCGGGGG TACCCTCACG
GTGCTGGGCG ACCTGAAACA GATGAGCCCC CGCTGGCTGG TGGGCGCCAG TTTCCTGGGC
TACGGAGCCA CGCTGGTGGT GGGCCTCGGC ATCCCGATCC CCGTCCTGGA TGAAGAGGTG
TTGCGCTATG CCGCCCTGGC GGACGAGGAT CTGTACGCGC CGGTCGTGGA CTACAGCGAG
GCCTATCCGC AGCGCCATCC CGGCAACCTG GGGCTCGTTA GCTACGCCGA ACTGAAGTCG
GGCACGATCG AGGTCCGGGG CCGCAAAGTA CCCACCGCGC CCCTGTCAAG CTACAGCAGG
GCGCTGGAGA TCGCCACTAT CCTGAAAGAG TGGCTCTTGT CCGGGGAATT TCTGCTGTCC
GAGCCGGTCC GCCTACTCCC GTCCCCGGAG GCCGGCCTTA CCGGCAAACC GCTTGAAATC
AAGGGTCCAA AGGAGTGA
|
|---|
| Protein sequence | MCQVSTKTYA EINARLREGK AVVVTAEEVV SMVREQGLTK TARRVDVVTT GTFAPMCSSG
VYLNFGHSAP RIKGHRVFLN DVPACGGLAA VDTFLGATSV PETDPLNRNH PGEFRYGGGH
VIHDLVAGNP VKLKVEGYGT DCYPRREIET WITLDDLNEV VLFNPRNAYQ NYNVAVNLGP
RTLYTYMGVL KPDLGNAHYS TSGQLSPLLK DPYFRTIGIG TRIFLGGGTG YVVWNGTQHF
PAVREGPVEG SVFAAGGTLT VLGDLKQMSP RWLVGASFLG YGATLVVGLG IPIPVLDEEV
LRYAALADED LYAPVVDYSE AYPQRHPGNL GLVSYAELKS GTIEVRGRKV PTAPLSSYSR
ALEIATILKE WLLSGEFLLS EPVRLLPSPE AGLTGKPLEI KGPKE
|
|---|
| |