| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0871 |
|---|
| Symbol | |
|---|
| ID | 6025909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 929158 |
|---|
| End bp | 931365 |
|---|
| Gene Length | 2208 bp |
|---|
| Protein Length | 735 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641593683 |
|---|
| Product | bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta |
|---|
| Protein accession | YP_001717016 |
|---|
| Protein GI | 169831034 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1614] CO dehydrogenase/acetyl-CoA synthase beta subunit |
|---|
| TIGRFAM ID | [TIGR00316] CO dehydrogenase/CO-methylating acetyl-CoA synthase complex, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAAG CCATTGCGGC GGCGGCCATC AGGGGCGCGG CGGGGCTGGT GGCCCGGGCC
GGGGAAGAAC TGGCCGGGGC GCTCGATACA TACGGTCCGG ATCAGCGGGT GGGTTTTCCG
AATACCGGGT ATTATCTGCC GGTCATTTAC GGGATCACCG GGCGGCGAGT GGGGCGGTTG
GGCGACCTGG AACCGGTGCT GGAGACGGCC CGGGGACTGG TGCCGGCGGT GCCGGCGGAG
CGGGTGTGGC TGCCCTACCT GGGCGGCGCC CTAGATGCGG GGATGGCTGC GCTGTTTGCC
GCCGAGACCA TCGAGGCGCT GCGTTACCTG ACCGCGCCCG GCAGTTACAC GGGCAAAACG
GCGCCCTCAC CCGGTGGCCT CTGGCTCGGG GCGGCGGACG ACGCCGTCTT GAGGCGCCGG
GGCCTGGAGT TCGTGGACGG CTCGGCTCCC GGGTTCGCTG TCTGCGTAGG GGCGGCGCCG
TCGGATGAGG CCGCGGTGCG CCTGGCCCGT GAATGCCAGG AGAAGAACCT GTACGTGTTC
ATGTGCGCGT CGTCCGGGGG GCGGAGCATG GCCGAACAAC TGGCGGCGCG GGGGGTCCAG
ATGGGTTGGG AGACCCGCCT GGTGCCCTTC GGTGCCGACG TGACGGCCAC CGTGTTCGCC
CTCGGATTTG CGGTGCGGGT GGCGCTTTCC TTCGGCGGGG TGGCTCCGGG GGACTATGCC
CGGCTCCTGT CCTACACCAC CAATCGGGTG TTCGCCTTCG TGCTGGCCCT GGGCGAGGTC
GACGACGAAA AGTGCGCTCA CGCGGCCGGA GCGCTCAACT TCGGGTTCCC GGTGGTCGCC
GACACGGACG TCCCCGAAAT CCTGCCGAGC GGCATCTGCA CGTACGAGCA CGTGGTGGCG
AACGTGCCGT ACGAAAGCCT GGTGAGCCGG GCCTGCGAGG TGCGGGGCTT GAAGATCACC
GTGGACCGGG TACCGGTGCC CGTGGCCTTC GGCCCGGCGT TCGAAGGCGA AACCGTCCGG
CGGGAGGATA TGCACGTCGA GTTCGGCGGG CAGAAGACCC CGGGCTTCGA GCTGGTGCGC
ACTGCCGGCC CGGACACGGT CGAGGACGGA AGGATCACCT TGTCGGGGCC GGACGTGGAC
GCCGTCGAAG AAGGCGGCGC CCTGCCCCTG GGGATCGTGG TAGACATCTA CGGGCGGAAG
ATGGAACCGG ACTTCGAGCC GGTGCTGGAG AGGCGCCTGC ACCACTACCT CAACTACGCG
CAGGGTGTTT GGCACATCGG CCAGCGGGAC GTGAACTGGG TCCGGATCAG CAAAGAGGCG
TACGGGCGGG GGTTCCGGTT GCGGCATCTG GGGGTCATCC TGTATGCTAA GCTGAAATCC
GAGTTCGCGA GCATCGTGGA CCGGGTGCAG GTGCGCCTGT CCACGGAAGC GGGTGAGGTG
ACGGCTTGGC GCGGGGAAGC CCGGGAATAC TACGCCCGGC GTGACGCCCG CCTGGCCGTG
CTGAGCGACG AGAACGTTGA CACCTTCTAC TCGTGCACCC TCTGCCAGTC ATTCGCGCCT
ACGCACGTCT GCGTGGTGCT GCCGGAGCGG GTGGGGCTTT GCGGTTCGGT CAGCTGGCTG
GACGCCCGGG CGGCGCACGA GATCGACCCG CACGGCTGCA ACCAGCCCGT TCCCAAGAAA
GACGTTTTGG ACGCGGCGGG CGGGGAGTGG GCGTCCTGCA ACGAGTTCAT CCGCACCCAC
TCCCGGGGGA CCATTGAACG GGTCAAGTTC TACACAATCA TGGACTCCCC GTTGACCTCG
TGCGGCTGTT TCGAAGCGCT CGTGTGCATC GTGCCCGAGT GCAACGGGTT TTTGATCGTG
AACCGGGAAC ACGCCGGGAT GACCCCGGCG GGCATGACCT TTTCCACCCT GGCCGGCAGC
ATCGGGGGCG GGGTGCAGAC CCCGGGGTTC ATGGGTGTGG GCAAGGCCTA CCTTGGCTCC
AGGAAGTTCT TGAAGGCCGA CGGAGGGCTC GCCCGGATTG TCTGGATGCC CGCCGCTTTC
AAGGAACAGA TGCGCCCGGT GCTCGAAAAG CGGGCCGCAG AGGACGGCCT GGGCGCGGAC
TTCGTGGACC GGATCGCCGA CGAGACCGTC GGGGTGGAGG TGGAGGAGAT CCTGGCCTTC
CTGTATGAGA AGGAGCACCC GGCCCTGAGC CTCGAACCGC TCTTTTAA
|
|---|
| Protein sequence | MSKAIAAAAI RGAAGLVARA GEELAGALDT YGPDQRVGFP NTGYYLPVIY GITGRRVGRL
GDLEPVLETA RGLVPAVPAE RVWLPYLGGA LDAGMAALFA AETIEALRYL TAPGSYTGKT
APSPGGLWLG AADDAVLRRR GLEFVDGSAP GFAVCVGAAP SDEAAVRLAR ECQEKNLYVF
MCASSGGRSM AEQLAARGVQ MGWETRLVPF GADVTATVFA LGFAVRVALS FGGVAPGDYA
RLLSYTTNRV FAFVLALGEV DDEKCAHAAG ALNFGFPVVA DTDVPEILPS GICTYEHVVA
NVPYESLVSR ACEVRGLKIT VDRVPVPVAF GPAFEGETVR REDMHVEFGG QKTPGFELVR
TAGPDTVEDG RITLSGPDVD AVEEGGALPL GIVVDIYGRK MEPDFEPVLE RRLHHYLNYA
QGVWHIGQRD VNWVRISKEA YGRGFRLRHL GVILYAKLKS EFASIVDRVQ VRLSTEAGEV
TAWRGEAREY YARRDARLAV LSDENVDTFY SCTLCQSFAP THVCVVLPER VGLCGSVSWL
DARAAHEIDP HGCNQPVPKK DVLDAAGGEW ASCNEFIRTH SRGTIERVKF YTIMDSPLTS
CGCFEALVCI VPECNGFLIV NREHAGMTPA GMTFSTLAGS IGGGVQTPGF MGVGKAYLGS
RKFLKADGGL ARIVWMPAAF KEQMRPVLEK RAAEDGLGAD FVDRIADETV GVEVEEILAF
LYEKEHPALS LEPLF
|
|---|
| |