| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0816 |
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| Symbol | |
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| ID | 6027412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 859747 |
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| End bp | 861804 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641593626 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001716963 |
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| Protein GI | 169830981 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.710147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCCGTCC AGAAAATCGT CAGCGCTTTG CGAGCGCATC CGGAATATTC CAGGGCTGTT
GTTGGTGTGT TGGAAACTCC GGCCCGGGAT GCAGCGTACA GAAATCCTTT TCCGCCGCTT
CCGGAGCCGA TTCGATCTTA TTTAGAGCGT GAAAGCATCG AACTCTATAC TCACCAAGCC
GAAGTGCTGG AGCGGGCCAG AAAGAAACAG AACGTCGTTC TGACTACGGC TACTGCCAGC
GGAAAGTCGT TGGCCTTCAC CCTGCCGGTT TTAGAGCAGT TGTATCAAAA TCCAGGCGCG
ACGGCGCTGT ATTTGTATCC GATGAAAGCT CTGGCTTACG ACCAGCTTTC GTTTTTGCGA
AAGCTGGAAC GGGAAACCGG CATCGCATAC AACCCCGCCG TCTATGATGG CGACACTCCC
CAGCTTCATA GAAAACAAAT CCGTCAGGAA TCGAGAATCG TGCTCACGAA TCCCCACGCT
TTGCACCGCT ATCTTTCCTG GCACAAACTC TGGCAGCGGT TTTTCAGGGG GCTGCAATAC
GTCATTATCG ATGAAGGACA TTGGTACAGA GGGCTGTACG GCTCCCACGT CGCCTTCGTG
TTCCGCCGGC TCCTGCGCGT TCTGGAGCAT TACGGCGCCA CGCCGCAAAT CATCCTGGCG
TCGGCCACCA TGGCCGATCC GGCTAAGCAC GGCAGGAACC TGACCGGAAA AGACTTCTCC
GTAGTGGATG GCGACGGCTC TGCCCGGAGC AAAAAGATAT ACGTTCTTTG GGACGCTGTG
GCTGCGGGCA AGTCGGAGCA CCTTCAGGCC GCCGAGCTTT TTGCCGCCTG CGTCGGGAGT
GGCCTTCAGG CCATATGTTT CGCGCCGTCG AGGAAGTTGG CCGTACTGAC TGCCAGGTGG
GCGGGGCAAA AAGTGGCCGG GGTTGCTTCT TATCGTGCTG GCTATTTGCC GGAAGAGCGC
AGGGAATTAG AGTCGCGGCT CAGGTCCGGA GAAATCCGGG GCGTTGCTTG TACAAACGCT
TTAGAGTTGG GTGTGAACAT TGGAGAATTG GACGCAGCCA TCATTTCTGG TTGGCCGGGA
ACGGTGGCAT CGTTTCGGCA GCAGGCGGGG AGAGTGGGGA GAAGTGGTCA GGAATCGTTG
GTTGTACAGA TATTTTTCTC CAATCCGCTG GACGGTTATT TGCTGCGAAA CCCGGAACTC
ATCTTCCGGG CGTCTTCGGA ACAGGCCGTT GTTGCATTAG ACCATTTCGA AATCCTGAAA
GCCCATATCA GATGCGCTGC TGAAGAACTG CCCTTGACTG CCGGCGATGA AAAATATTTC
GGCCCTCGCT ACAAGGATGC AGTTCGTACT TTGATTAAGG AAAAAAGCAT TGTTTTGGAC
TCCCAGGGTT GGCAGCCGGG GCGGGAAACT TGCGTCATCA AGCGATACGT CAGTGCGGGG
AAAAACGTTG CGTCCAGAGT TAGCCTTTCG GCTTTTGATG AAGGCGCGAT GCGCCTTCTT
CACGACGGCA GGTTGTTGGA AACCTTGAGC CTTTCCAGGG CCTGCCGGGA CGCCCATCCT
GGAGCGGTAT ATCTCCACCG GGGTGAGCCT TACGAAGTTA GGGAATTTGA TCCTGGCCGG
GGAATCGTCA CCGTGGAGCG CAGTTCCGGA GAGCTTTATA CCCAGGCCCA GGTGCACACG
GCCATTTATC CCAGGCAAAC CCTGCAAACC CGAGAATTTC CTGGTGTCGT TTTAAATGTC
GGCAGGGTGG TTGTTTCCCA GAAAACCCGG GGCTATTTGG TCAAGAAATA CGACGAAGTG
ATTGGGCGGC ATATACTTGA AGGCATGCCT TCGGTTAATC TTGATACTGT GGCTGCATGG
CTTCAGCTGC AAAGAATTCC TTTGATTGCA GACCTGGAAG GCGGCCTGCA CGCGGCGGAG
CATACTCTCA TTGCTGTTGC TCCGCTGGTG GCCATGTGCG ACCGGTGGGA CATTGGCGGC
GTTTCGCTGC CCAGGGATCG CGATGGGATG CCGGCCATTT ACGTTTACGA TGACTTTCCT
GGTCACCAGC TTCGGTGA
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| Protein sequence | MSVQKIVSAL RAHPEYSRAV VGVLETPARD AAYRNPFPPL PEPIRSYLER ESIELYTHQA
EVLERARKKQ NVVLTTATAS GKSLAFTLPV LEQLYQNPGA TALYLYPMKA LAYDQLSFLR
KLERETGIAY NPAVYDGDTP QLHRKQIRQE SRIVLTNPHA LHRYLSWHKL WQRFFRGLQY
VIIDEGHWYR GLYGSHVAFV FRRLLRVLEH YGATPQIILA SATMADPAKH GRNLTGKDFS
VVDGDGSARS KKIYVLWDAV AAGKSEHLQA AELFAACVGS GLQAICFAPS RKLAVLTARW
AGQKVAGVAS YRAGYLPEER RELESRLRSG EIRGVACTNA LELGVNIGEL DAAIISGWPG
TVASFRQQAG RVGRSGQESL VVQIFFSNPL DGYLLRNPEL IFRASSEQAV VALDHFEILK
AHIRCAAEEL PLTAGDEKYF GPRYKDAVRT LIKEKSIVLD SQGWQPGRET CVIKRYVSAG
KNVASRVSLS AFDEGAMRLL HDGRLLETLS LSRACRDAHP GAVYLHRGEP YEVREFDPGR
GIVTVERSSG ELYTQAQVHT AIYPRQTLQT REFPGVVLNV GRVVVSQKTR GYLVKKYDEV
IGRHILEGMP SVNLDTVAAW LQLQRIPLIA DLEGGLHAAE HTLIAVAPLV AMCDRWDIGG
VSLPRDRDGM PAIYVYDDFP GHQLR
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