| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0797 |
|---|
| Symbol | |
|---|
| ID | 6027326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 833593 |
|---|
| End bp | 835161 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641593611 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001716948 |
|---|
| Protein GI | 169830966 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3472] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGACC TGACGATCCG CGAGATTCTC GATCTCGTGC TCCGCGGCCA GATTCGCATC
CCGGCGTTTC AACGTGGTTT CGTCTGGGAC CCCGAAAAGG TCGCCTTCCT CATGGACAGC
ATCTACAAAG GCTATCCCTT CGGATCGCTC TTGCTCTGGC GCACGCGCGA ACAGTTACGG
CACGAAAAAC AACTTGGCCC ATTCCCCCTT CCCGAGCGTG ATCCTGATTA CCCGATCGAC
TACGTCCTGG ACGGTCAGCA ACGGATCACA TCTATCTTTG GCGTTTTCCA GACTGAGATC
CGGCCCGATC CCACCGTCGA GTGGGCAAAC GTGTATTTTG ATCTATCGGC GGATCCGGAC
GCGCAGGAGT CGCAGTTTGT GGCCCTGCGG CCCGAGCAAG TTGACTCTCG GCGTCACTTT
CCCTTGGACA CGCTTTTCCG GCCCGTTGAG TATCGACGCA CGACCGAGAG GTTTGGCGAC
CAAGACCTGG TTCGCATCGA CGACATGCAA GCCCGATTTA AGGAGGCACG GATCCCCTAC
CAGCTTCTTA CGACCGAGGA TCGAGCAAAG GTTGCGATTG TCTTCGAGCG CATCAACCGG
ATGGGCGTGC CGCTTGATAC GCTTCAGTTG CTAACGGCTT GGACCTGGAG CGAAGATTTC
GAGCTACAGC GTGCGTTCGA GGACCTGCGC GACGAACTTG AGCCGTTCGG CTTCGCCGGA
GTCGGTGAGG ACTCGAACTT GCTTCTCAGA TGTTGCGCGG CGATTCTCGC AGGGGATGCC
TCTCCAACTG CCCTAATTAG ACTGCGCGGC GCGGATGTGC GGACCCGGTT TAAGGAGATT
GTTAACGGCG TCAAGGGCGC CATCGACTTT CTTCGCATCA ACGTCAACGT GCAGACGGTC
GCGAATCTGC CGTTCTCGAC CATCCTCGTG CCACTGTCGG TGTTCTTTGC GAGCCCGGGG
GAACAGTTTG TACAGGTTAC AGACGAACAG CGCGCGCGCC TCGTGCGTTG GTTTTGGCGG
TCGTGTTTTT CTCGCCGCTA TAGCAGTGGT GTCCTGCGAA ATCTGCGTGA CGACATTCAA
GCTGTCTCCA TGCTCAAGGA GGGACGGCCG AATACCCTTG GCGATTTCCC CGTTGTCGTG
AAGCCCGACT TCTTCACGTC CACTGAGTTC AGGCTGAACA CCGTTAACAC GACGACGTTC
ATCCTGCTTC TGGCGCAGCA GCGCCCGCTC AACTTTGTTT CCGGGCAGCA GGTCGCGATG
GAAAAAGTTT TACGGGAGTA TAACCGTAGC GAGTTTCACC ATTTATATCC GCGGGCTTTT
CTTACCAGAG TAGGTGTCCC CGTCAATCAG CACAGCGTAC TGGCCAACTT CTGCTTCCTC
TCAAAGGCCG ACAATGCCAC TCTCGGAGGT GACGCGCCTA GCGCCTACAG AGAACGGATG
CCGACCGTCG TGGATGAAAT CCTTCAACGA GCGCTTTGCC CACTATCTCT ATTTAGCAAT
GACTATCAGC AATTTCTCGC TGAACGCAGC GAGCTGCTTA AGCGTACCGC GGAGGCGCTG
ATGCAGTGA
|
|---|
| Protein sequence | MADLTIREIL DLVLRGQIRI PAFQRGFVWD PEKVAFLMDS IYKGYPFGSL LLWRTREQLR
HEKQLGPFPL PERDPDYPID YVLDGQQRIT SIFGVFQTEI RPDPTVEWAN VYFDLSADPD
AQESQFVALR PEQVDSRRHF PLDTLFRPVE YRRTTERFGD QDLVRIDDMQ ARFKEARIPY
QLLTTEDRAK VAIVFERINR MGVPLDTLQL LTAWTWSEDF ELQRAFEDLR DELEPFGFAG
VGEDSNLLLR CCAAILAGDA SPTALIRLRG ADVRTRFKEI VNGVKGAIDF LRINVNVQTV
ANLPFSTILV PLSVFFASPG EQFVQVTDEQ RARLVRWFWR SCFSRRYSSG VLRNLRDDIQ
AVSMLKEGRP NTLGDFPVVV KPDFFTSTEF RLNTVNTTTF ILLLAQQRPL NFVSGQQVAM
EKVLREYNRS EFHHLYPRAF LTRVGVPVNQ HSVLANFCFL SKADNATLGG DAPSAYRERM
PTVVDEILQR ALCPLSLFSN DYQQFLAERS ELLKRTAEAL MQ
|
|---|
| |