Gene Daud_0786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0786 
Symbol 
ID6027201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp816986 
End bp817915 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content52% 
IMG OID641593601 
Productretron-type reverse transcriptase-like protein 
Protein accessionYP_001716938 
Protein GI169830956 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAT GGTACAGCCT TATTGACAAG GTCTACCGGC TTGAAAACCT CATTCAAGCC 
TATCGTGCCG TAAGAGCCAA CAATGGCGCT CCCGGAGTAG ACGGAGAGAC CGTGGAAGCT
TTTGGCCGGA ACTTGGACGA GAGGCTGGAC CAACTTCATC ACGAACTGAA AACCGGCACG
TACGAGCCAC AGCCCGTCCT ACGCGTGGAA ATACCAAAAC CGGATGGCAG TAACCGCCCA
TTAGGCATTC CCACCGTAAG AGACCGGGTG GTCCAACAAG CCCTGCTCAA CATTCTGCAG
CCCATCTTTG ATCCTGACTT TCACCCATCC AGCTATGGAT ACCGACTGGG ACGTTCCTGC
CATCAAGCCG TAGCTAAAGC GGAAAGATTT ATGAACAGAT ATGGACTGGA ACACGTAGTG
GACATGGATC TGTCCAAATG CTTTGACCGG CTCAACCACG AACTGATCCT GGAAGGCATT
AACCGGAAAG TCAGCGACGG CAGCGTTCCG TATTACGGAT CGCGCCGGAT AACTGCCCAA
TTAAAACGCG AAGGTTTTCT GGTCAACCGC AAAGCTGTGC AGCGCCACAT GCGGGAGATG
GGGATCGCGG CCATCTCCCC GGGACCGAAC TTAAGCAAAA GACGTTACGA ACACCTGGTT
TATCCCTACC TGTTGAGGGG GGTGGTCATC CAACAACCAA ATCAGGTCTG GGGCATTGAC
ATCACCTACA TCCGCATGCT TAAGGGATGG ATGTACATAA CGGCCGTCCT GGACTGGTAC
TCCCGCTTCG TAGTAAGCTG GGAGCTGTCC GATACCCTTA TCAGTAGACT TCGTGTGTGC
TGCCGTCAGC TAGGCCTTCT CCCTGACCAG GCCACAAATT ATGAACAGCG ACTAGGGCAG
TCTAGTCCAC AATATATCCA AATTACTTAA
 
Protein sequence
MKKWYSLIDK VYRLENLIQA YRAVRANNGA PGVDGETVEA FGRNLDERLD QLHHELKTGT 
YEPQPVLRVE IPKPDGSNRP LGIPTVRDRV VQQALLNILQ PIFDPDFHPS SYGYRLGRSC
HQAVAKAERF MNRYGLEHVV DMDLSKCFDR LNHELILEGI NRKVSDGSVP YYGSRRITAQ
LKREGFLVNR KAVQRHMREM GIAAISPGPN LSKRRYEHLV YPYLLRGVVI QQPNQVWGID
ITYIRMLKGW MYITAVLDWY SRFVVSWELS DTLISRLRVC CRQLGLLPDQ ATNYEQRLGQ
SSPQYIQIT