Gene Daud_0779 details

Gene Information

• Locus tag: Daud_0779
• ID: 6027190
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: +
• Start bp: 809552
• End bp: 811633
• Gene Length: 2082 bp
• Protein Length: 693 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 641593596
• Product: S-layer domain-containing protein
• Protein accession: YP_001716933
• Protein GI: 169830951

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.725533
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGAGGC AGCGCTATCT GAAACTCCTG GGCATCCTGG CGGTCGCTGC CCTGCTCGCG 
GCAGTTGTGG CTGGGGGGCT GGCCTTCGCG CAGGGCAGCC CCTCAGCGCC TGTCCTGCCG 
CAGAGCTTCT GGGGCAGCGT GAAGGACGCG AACGGAAACC CGGTTCTCTC GGGCACCGTT 
GAAGCCTGGT TCAAAGGTGA GAAGCAGGAC AGCATCGCCA TCGTCAACGG GCAGTACGGC 
GGCCCCGGCG GGCTTGAGGA CAGGCTGACC GTGCAGGGGT TGGCCGAAGA CATCGGGAAG 
ACGATCGAGT TTTACGTGAA CGGGGTAAAG GCCAACGAGA CTGCGAAGTA CACGCCCGGC 
GAGAAAACCA GGCTCGACCT GACGGCGGCG GCGCCCGGCG ACATGACGCC GCCCGTAGTT 
GAAAGCACCG ACCCGGCCGG CGGTGCCCCG AACGTCCCGG TGGGCAAGAC CATCACCGTG 
ACCTTCAGTG AGAGTGTGCT AAAGGGGGTG TATTTCAGCG ACATCTCGGT CAAGGACGCC 
GCGGGTAAAG ACGTTGCCGT GACCAGGAGC ATTGAGGGCA AGGTTCTAAC CATCGACCCG 
ACCGCTGACC TGGCCTACAG CACCAAATAC ACCGTGACCA TTCCCGCCGA TGCGGTGAAG 
GACCTGGCGG GGAACGCTTT GGCGCAGACC CATACTTTTA GCTTCACCAC CGTGGCTGCG 
CCGGACACCA CGCCGCCTGC TGTGGTGACC ACCGACCCGG CCGGCGGTGC CCCGAACGTC 
CCGGTGGGCA AGACCATCAC CGTCACCTTC AGCGAGGACA TGCAGCAGGG GACTGCTTAC 
GATGCCATCT CGCTCAAGGA CGCCGCCGGT AAAGACATTC TCGTGACCAG GAGCATTGAG 
GGCAAGGTCC TGCGCATCAG GCCGAATGCC AACCTCGCCT ACAGCACCAA ATACACCGTG 
ACCATTCCCG CCGGCGCGGT GAAGGATGCA GCGGGCAATG AACTGGCGGC AGAGTACACC 
TTCAGCTTCA CCACCGTGTC GGCGGCGGCA GCACCGGCTC CAGGACCAGC TCCTGCACCT 
GCTCCTGCCC CGGCGCCCGC ACCTGCCCCA GCGCCAGCGC CCGTGACGGT TGTTGAGCAG 
CCTGTGGCTG CCGACAAGCC TACGGTTGTC AAGCTGGCAG GCGTGGTGGA AATCACAGTG 
CCGGCCGGTG CCGTTACCGG GGATGCTCCG AAGATAAGGG CCCAGGTGTT GACGGAAGCG 
GCGGCTGCTC CCTTGCTGGA TAAAGCGGTG GGGGCCGGGC TGGTGCCGGC CAGTAAGATT 
GTCCAGCTTA CCCTCACCGG AGGCGAGTTT AAGGGATCGG TGCAGCTTAC CCTGAACTTT 
GATGCGGCCA AGGTGGCTGC GGGCCAGGTG CCCAGCGTGT TTGTCTACAA CGAGCGGACC 
GCCCGCTGGA TTTACCTTGG CGGCCAGATC GGCAACGGTG TCATTACCGT CACGGTGGAC 
AAATTCTCCA AGTTTGCGGT GTTTGCCACC AGGCCATTAC CGGCACTGGC CGATATTGCC 
ACCCATTGGG GCAGAGATTC TATCAGGACC TTGGCTGGGA TGGGCATTGT AGCCGGTTAT 
CCTGACGGTA ATTTCAAGCC CAATGCCAAC ATTACCAGGG CCGAGTTTGT TGCTATGCTG 
GTGCGTGCCT TGGGGCTTGA GCATCGGGAG GCAGCGGCAG GTCGTTTCAA GGATGCGGCC 
GGTTTTGGCT GGGCGCGTGG TGTTATCGGT GCGGCGGTGG AGGCCGGCCT GATTGGCGGT 
TATCCCGACG GTACGTTTGG CGCAGCCCGC CCGATTACCA GAGCGGAGAT TGCTGTCATT 
CTGGAGCGCG TGGTACGCAA AGGTCTTGTG CCGGTTACCC TGGCCGAAGA AGTGACCTTT 
ACTGATGCGG GAGCCATTCC GGCCTGGGCA AAAGACGGCA TCAAGGCCGC CAGCAGGGCT 
GGCCTGGTGC GCGGTTTCCC GGATGGCACT TTCCGACCCG CTGCCAATGC TACCAGGGCG 
GAGATGGCGG CTATGCTGTA CCGGCTGGTA GCCCAAAGGT AA 

 

Protein sequence

MQRQRYLKLL GILAVAALLA AVVAGGLAFA QGSPSAPVLP QSFWGSVKDA NGNPVLSGTV 
EAWFKGEKQD SIAIVNGQYG GPGGLEDRLT VQGLAEDIGK TIEFYVNGVK ANETAKYTPG 
EKTRLDLTAA APGDMTPPVV ESTDPAGGAP NVPVGKTITV TFSESVLKGV YFSDISVKDA 
AGKDVAVTRS IEGKVLTIDP TADLAYSTKY TVTIPADAVK DLAGNALAQT HTFSFTTVAA 
PDTTPPAVVT TDPAGGAPNV PVGKTITVTF SEDMQQGTAY DAISLKDAAG KDILVTRSIE 
GKVLRIRPNA NLAYSTKYTV TIPAGAVKDA AGNELAAEYT FSFTTVSAAA APAPGPAPAP 
APAPAPAPAP APAPVTVVEQ PVAADKPTVV KLAGVVEITV PAGAVTGDAP KIRAQVLTEA 
AAAPLLDKAV GAGLVPASKI VQLTLTGGEF KGSVQLTLNF DAAKVAAGQV PSVFVYNERT 
ARWIYLGGQI GNGVITVTVD KFSKFAVFAT RPLPALADIA THWGRDSIRT LAGMGIVAGY 
PDGNFKPNAN ITRAEFVAML VRALGLEHRE AAAGRFKDAA GFGWARGVIG AAVEAGLIGG 
YPDGTFGAAR PITRAEIAVI LERVVRKGLV PVTLAEEVTF TDAGAIPAWA KDGIKAASRA 
GLVRGFPDGT FRPAANATRA EMAAMLYRLV AQR