Gene Daud_0713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0713 
Symbol 
ID6026925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp747443 
End bp748825 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content56% 
IMG OID641593538 
ProductIS605 family transposase OrfB 
Protein accessionYP_001716875 
Protein GI169830893 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID[TIGR01766] transposase, IS605 OrfB family, central region 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGTGC TCAAAAACGT AATCTCAAGC AAACAACGCA TTAAGAGATT TATCACCGGC 
ACCCCGGAGA TGATCCGGCA GACGGAAGAA ATCTACCGGG CAGTTTTGGG TTTTTACCTG
AACGTCATTC ACGACAACCT CGATAAGCTG CCCGAATGGA ACAGGAATTC CGGCACGAGG
GCGCTGGAAA AACTGACCGT CAGGACCGAA CCCCGCACGA ACAGGAAGAC CGGGGAAAAA
TTCGGCGGCA ACCCCAACCC GCCTTACCCG ATAGACACCG TTTGGCCCAA GTTTCCCGCA
TATTTGCGCC GGGCAATTAT TGCCAAGGCT ATCGGGATGG CACAGAGCTG GTATTCCAAC
TACCGGCGGT GGCTCAGGAA AAAAGAAAGG ATGCAGGCCA GGAACGAAAG GCGTGTCGCC
GAAGGCAAAA AGCCGATACC TTTCGACGAG CACCCGCCAA AGTACCCTAC GGCGGGGAAC
GTTGGTATGA CCTTCTACAA GGGTGACTTT AAAAACCTTT CGCTGAAAAC CAACACCATC
CAGCTGAAAG TCTGGGACGG CTATGACTGG CGGTTCATCA CCGTGGAGGT TGAGCCCACC
AGTCACTCTA GAAAGCTCCA TCTGGATGAT TCCTGGGAGA TGACCGTGCC CTCCATTTAC
GAAAAAGAGG GCCTCTTCTG CCTGGTGACC GCTTTCGAGA AGAAGTCCAA CGTCATCAAG
TTCGCCGACT ACTACCTGTC TAAGAACCCG AAAGTGCTTG CCGTGGACTT GAACCTGGGT
CGCAGGAACC GGGCGGTGTG CGCCCTGGTG GGCAAGGGCG GTACGGTTCA CAAAGTCAGA
CACATCAGCC TGGCGGCGTG TAACACGACG GACGTCCACC GTCTGCTGGG GCTCATTGCC
CGGGACGTGA GCGGTCTGGG GATAGTCCCG AAGGGCCACC GGCCCTGCAA GAGGCTCTGG
CGCAAGGTCC GCGCGGTGAA TGACAATTAT GCCCACCATT TAAGCAAACA GTTGGTTGAC
CTTGCCGTGG AGTGGGGTGC AAGGGTCATC GTCTTCGAGA ACCTGAAACG CTTCAGGCCG
GACAGGGACA AGCACGGTTC GGCCAGGATG CGCCGGAGGA TTGGTTACTG GTTGCACCGG
AGGGTGATTA AGCATACCGC GTACAAGGCA AAAGTGCGGG GCATACTGGT TGCTCTTATC
CCTCCGAAGG ACACCAGCAA CCGGTGTTCG TTGTGCGGCT CGCTGGATAC TTCAAGAGAC
GGCAACGTTT TGAAGTGCAG GAACTGTAGC ATTGTTCACA ACAGCCACAT CAACGCTGCC
ATTAACACTG GGACGGCCTG GTTCGTTCGG GAGGAAAAGC GGTTGCGACA AAAAACCGCT
TGA
 
Protein sequence
MPVLKNVISS KQRIKRFITG TPEMIRQTEE IYRAVLGFYL NVIHDNLDKL PEWNRNSGTR 
ALEKLTVRTE PRTNRKTGEK FGGNPNPPYP IDTVWPKFPA YLRRAIIAKA IGMAQSWYSN
YRRWLRKKER MQARNERRVA EGKKPIPFDE HPPKYPTAGN VGMTFYKGDF KNLSLKTNTI
QLKVWDGYDW RFITVEVEPT SHSRKLHLDD SWEMTVPSIY EKEGLFCLVT AFEKKSNVIK
FADYYLSKNP KVLAVDLNLG RRNRAVCALV GKGGTVHKVR HISLAACNTT DVHRLLGLIA
RDVSGLGIVP KGHRPCKRLW RKVRAVNDNY AHHLSKQLVD LAVEWGARVI VFENLKRFRP
DRDKHGSARM RRRIGYWLHR RVIKHTAYKA KVRGILVALI PPKDTSNRCS LCGSLDTSRD
GNVLKCRNCS IVHNSHINAA INTGTAWFVR EEKRLRQKTA