| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0704 |
|---|
| Symbol | |
|---|
| ID | 6027379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 737323 |
|---|
| End bp | 738894 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641593529 |
|---|
| Product | transposase IS66 |
|---|
| Protein accession | YP_001716866 |
|---|
| Protein GI | 169830884 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3436] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0762527 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCATGTG TCGAATTGGT AGACATGGAT AATGCAGCGA AAACCATCGA AGAACTCCAG
ATAAAATGTG CTTTACAGCA ACAGCAAATC GCTGAACTAA CGGCCAAACT TAACTGGTTT
GAAGAACAGT TCCGTCTCAG CCAACAGCGT CAATTCGGCC GCTCCAGTGA GCAGACCCAA
AACCAAGTGG AGCTTTTCAA CGAGGCAGAG GCCGAAGCCA GAGCGTCTTT CGAACCAACG
ATCGAGGAAA TCACCTACCG CCGCCGCAAA AAGCAGGGCC GGCGCCAGGA ACAGCTAAAG
GATCTGCCGG AGGAGATCAT TGAATACCGG CTCGCTCCGG AAGAGCAGAG ATGTGCCTGC
GGCGGCGCCC TGCACGAAAT GAGCACCGAG GTCAGGCAGG AACTCAAAAT CATTCCGGCC
CAGGTCAGTG TCGTCAAGCA CGTCCGCTAT GTCTACGCCT GCCGCCGCTG TGAACGGGAA
GACATCAAAA CCCCCATCGT CACCGCCCCG ATGCCGGCGG CGGTACTGCC GGGAAGCCTG
GTTTCCCCCT CGGCCATGGC CTACATTATG ACCCAAAAGT ACGTGGAGGG CATGCCGCTT
TACCGCCAGG AACAACACCT GGCCCGTCGG GGCGTGGAAC TCTCCCGCCA AACCCTGGCC
AACTGGATGA TCCAGGGTGC GGATCGCTGG CTAAGCCTCC TGTATGCCCG GATGCACAAG
CATCTACTGG CGCAAGACAT CCTGCACGCC GATGAGACGA CCTTGCAGGT ACTCAATGAA
CCGGGCCGGT CGGCGCAAAG CACTTCCTAC CTCTGGCTTT ACCGCACCGG GCGGGCCGGA
CCGCCAATAA TCCTTTATGA CTACCAGACC ACCCGGGCCA GTAAACATCC CCGCCGGTTC
TTGTCCGGCT TTAAGGGTTA CCTGCATGTC GACGGCTATA CCGGCTACAA CGAACTGCCG
GATGTGACCC TGGTCGGGTG TTGGGCGCAT GCCCGGCGCA AGTTCGACGA AGCGCTAAAA
GCACTGCCCA ACGCCCAGCG CGGTGCGGCG GTGGCCGCCA AAGAAGGGTT GGAGTTCTGC
AACCGTCTCT TTGCCATCGA ACGGGAGTTC CGTGAAGTCA CTCCCCAGGA GCGTCATACG
CGTCGCCAGG AACTCAGTCG GCCGGTGGTG GAGGCTTTTT CAGCCTGGCT GAAATACCAG
AGCCCCAGAG TTCTGCCGAA AAGCGCCTTC GGCCAAGCCA TCAAGTATTG CCACAACCAG
TGGGACAGGC TTACCGTCTT TCTGGAAGAC GGCCGCCTGG AGTTGGACAA CAACCGCAGT
GAGCGCTCCA TTAAACCATT TGTCATCGGC CGTAAGAACT GGCTATTCGC GAACACCGCC
CGTGGGGCAA GCGCCAGTGC CATCATTTAT AGTGTTGTGG AAACAGCGAA GGAAAACGGC
CTCAACCCCT TCAGTTACCT GCAGTATCTT TTTGTAAAGC TGCCGAACAT GGATATTCAG
GATGAACAGG CCTTAGAAGA GTTGCTTCCC TGGTCGGCAA CACTGCCACC GATCTGTCGG
GGTGGCAAGT AG
|
|---|
| Protein sequence | MPCVELVDMD NAAKTIEELQ IKCALQQQQI AELTAKLNWF EEQFRLSQQR QFGRSSEQTQ
NQVELFNEAE AEARASFEPT IEEITYRRRK KQGRRQEQLK DLPEEIIEYR LAPEEQRCAC
GGALHEMSTE VRQELKIIPA QVSVVKHVRY VYACRRCERE DIKTPIVTAP MPAAVLPGSL
VSPSAMAYIM TQKYVEGMPL YRQEQHLARR GVELSRQTLA NWMIQGADRW LSLLYARMHK
HLLAQDILHA DETTLQVLNE PGRSAQSTSY LWLYRTGRAG PPIILYDYQT TRASKHPRRF
LSGFKGYLHV DGYTGYNELP DVTLVGCWAH ARRKFDEALK ALPNAQRGAA VAAKEGLEFC
NRLFAIEREF REVTPQERHT RRQELSRPVV EAFSAWLKYQ SPRVLPKSAF GQAIKYCHNQ
WDRLTVFLED GRLELDNNRS ERSIKPFVIG RKNWLFANTA RGASASAIIY SVVETAKENG
LNPFSYLQYL FVKLPNMDIQ DEQALEELLP WSATLPPICR GGK
|
|---|
| |