| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0698 |
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| Symbol | |
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| ID | 6027393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 732089 |
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| End bp | 733813 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641593524 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001716861 |
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| Protein GI | 169830879 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.247316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTTTT CAAAGGGAAT GCTGGAGCTT ATTGAAGAAC TAAAATTCCA GGCTGGTCAA
TTGCCCTTGG ATTGGGTAGA GGTTACTGGA AAGGCGGCGC AAGCATACGT TGGGCGGTTG
CGGACCTTGC TGGAGCGGGC AGGGCAAGAG GCGAACGAGG CGGAACTGCG CGGAGCAGCG
AGCGACTTAT TGGCGTTGTT TGCTGGAAAC CATGACGAGG AACTCTTGCG GCGGCGTATA
GAACTCGGAA GAAAGCTGGG CGTTGCAGAA GTGTCGCTGG AGCAAATGGT AACAGCCTAT
GGGTTCTTTT TCGGGCGTTG GTGCGACGAA CTGGTCCCGC TTATCCATAC CCTGGAGAGA
GAACTGAAAA GCTTTAAGTA CGGCGGAACA TCGTTGCTTA TTGACCTTGG CCTGCTACTC
CTGGGATACA GGGGAGAAGT AGCGCGTCAA ATGCAGATGT TTTCGACAGT AGATGTCCTT
ACAGGCCTTT TGAGCCGCCG CAAGTTCGAA GAAGAGTTGC AGCAGGCAAT CGAGTTTGCG
CGGTGCACAA AAGGAGAGTT TTCTTTATAC TGGATAGACA TTGATAATTC TAAGCTGATT
AACGACATTT ACGGTTATAC CGTAGGGGAT ATTGTACTGA AGGTTGTGGC TGGCTTTCTG
CAGGAGTCGT TCCCCGACGC CTTTACTATT GCACGCATAG GCAGTGACGA ATTTGGGATT
GTGCTGATGG ATACAGGTCC TGCTGAGGCC CTGGCAAAGG CGCAGGTGCT ATGTCATGGC
ATTGCCGAGC TGCAAAGTCG TCCTTTGGGG GAGGAGGGCA TTTTCATTAC CAGCAGTATT
GGCGTGGCTT CGTACCCCCA CCATGGGCAA GCGCTGGCCG ACCTTATGTT AGCTGCCGAG
GTTGCTCAGG TAACGGCCAA GAGGAAAGGG AGGAACCGGG CGCAGCTCAT AGATGCGGTC
GACGAGAGTA CTAATCCTAC TGTGGTTCAC GAGAGAATTC TTCTCTTGCG AGAAGCTCTG
CGTTCGAAGG AGTGCATCGT CCCCTTTTAT CAGCCGATTG TAGATTTAGA GACTGGCAAG
CCATTAGGTT ACGAAGTGCT TGCCCGCGTG AGGAGAGGAG AAAAGTTTCT TTCTGCCGGG
CTTTTTATAG AGGCGGCCGA GCAATCCGGC CTTATGAAGG ATATTGGTAA TATCGTCATA
GAGCAGGCCA TGCGGGAAAA AAAGAGCTCT TGGGCGAAGA GCAAGCTTTT CTTTATTAAC
TTCTCCATGC GCGAGTTGGA GAACAGAGAA ACTCCAGGGT TCCTGGCTGA CCTGTTCAGC
CGCTACGGCA TTCGTCCGGA AGAAATTGTG GCCGAAATTA CCGAGCGAGA AGCCGTGCTT
GATATTAATG CCATGCATGC TTTCGCCAAG GAGCTGACAG ATCTTGGGGT GCGCCTGGCG
GTCGACGACT TTGGAAGCGG TTTTTCCTCA TTTATTTATC TTCGTTACTT TGACTGTTAC
TTTGCCAAGA TTGAGGGCTC CCTGGTGCGT GAGATAACCA GGAGTGGACG CTCCCGGATG
ATTGTAGAAA ACATGGTAAA ACTTTTGCAA GGGCTTTCGA TAGAGGTGGT GGCCGAGTTT
GTAGAGAACC GTGAAACAGC TGAAATTTTG CGCCGCGCCG GCGTTCGATA CGGGCAGGGT
TATTATCTGG GCATGCCCGT ACGGTGCCCT GGTAACGGGG ATTAG
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| Protein sequence | MRFSKGMLEL IEELKFQAGQ LPLDWVEVTG KAAQAYVGRL RTLLERAGQE ANEAELRGAA
SDLLALFAGN HDEELLRRRI ELGRKLGVAE VSLEQMVTAY GFFFGRWCDE LVPLIHTLER
ELKSFKYGGT SLLIDLGLLL LGYRGEVARQ MQMFSTVDVL TGLLSRRKFE EELQQAIEFA
RCTKGEFSLY WIDIDNSKLI NDIYGYTVGD IVLKVVAGFL QESFPDAFTI ARIGSDEFGI
VLMDTGPAEA LAKAQVLCHG IAELQSRPLG EEGIFITSSI GVASYPHHGQ ALADLMLAAE
VAQVTAKRKG RNRAQLIDAV DESTNPTVVH ERILLLREAL RSKECIVPFY QPIVDLETGK
PLGYEVLARV RRGEKFLSAG LFIEAAEQSG LMKDIGNIVI EQAMREKKSS WAKSKLFFIN
FSMRELENRE TPGFLADLFS RYGIRPEEIV AEITEREAVL DINAMHAFAK ELTDLGVRLA
VDDFGSGFSS FIYLRYFDCY FAKIEGSLVR EITRSGRSRM IVENMVKLLQ GLSIEVVAEF
VENRETAEIL RRAGVRYGQG YYLGMPVRCP GNGD
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