| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0644 |
|---|
| Symbol | |
|---|
| ID | 6025483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 679959 |
|---|
| End bp | 681212 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641593473 |
|---|
| Product | beta-ketoacyl synthase |
|---|
| Protein accession | YP_001716810 |
|---|
| Protein GI | 169830828 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0269008 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGGCCGC GAGTGGTAAT TACCGGTATG GGGGCAATCA CGCCCCTCGG CACCGGTCTG
GAGGTGTTCT GGTCCGCCCT GGTCGCGGGG CGTTCCGGAA TCAGAACCAT TCAGTCGTTT
GACGCTGGGG CTTTCAGAAC ACGGATCGCC GGCGAAGTGC CCGATTTTGA ACCAACGGAC
TACATCGAGA AGAAGGAAGC CCGACGGATG GACCGGTACG CGCAGTTTGC GGTGGCCGGC
GCGGGCATGG CGATCAAGGA CGCCGGGATC GAGCTGGACG GCCTCCGCCG GGAACGCGCG
GGGGTGGTCA TCGGTTCGGG AATCGGCGGC ATGCACACCT TCGAGGAACA GGCCCGGGTC
CTGTTCGAGC GCGGCCCCGA CCGCGTGAGC CCCTTTTTTG TACCGATGAT GATCGGGAAT
ATGGCGGCCG GTCAGATTGC GCTTACCTAC GGGTTGTGCG GACCCAACGT CACTGTGGTC
ACCGCCTGCG CGTCCGGCAA TCACGCTATC GGGGATGCCT TTAAGGTGAT TCAGCGCGGT
GACGCCGACG TGATCATCAC GGGCGGTACG GAAGCATCAA TCACCCCGCT GGCACTGGCC
GGCTTTTGCG CGATGAAGGC GACTTCGGTG CGGAACGACT CCCCGGAGCA GGCTTCACGG
CCCTTTGACG CCCAGCGGGA CGGGTTCGTC ATGTCTGAGG GCTGCGGCAT TCTGGTGCTA
GAGAGTCTGG AACACGCTCT GCAACGGGGA GCTCCCCGGA TCTACGCCGA GGTCATCGGG
TACGGCACCA GTTGCGACGC CTACCACATC ACCGCCCCCG ATCCGGAAGG GTTGGGCGCG
GTCCGCTCGA TGCAGGCCGC TCTGCGCGAC GCGGCCGTCG AACCGGACGA GGTGGACTAC
GTGAACGCTC ACGGTACTTC AACGTCTTTA AACGACCGGG TGGAAACCTT GGCCTTAAAA
AGCGTTTTCG GCCCCGCCGC TTCTAAATTG GCGGTCAGTT CGACCAAGTC CATGACCGGG
CATCTGCTCG GTGCCGCGGG AGGCCTGGAA GCGGTGATCT GTGCCCTGGT GCTTCAGCGG
GGGGTAATCC CCCCAACAAT AAACTATGAA CACCCGGACC CGGAATGCGA CCTGGACTAT
GTGCCGAACA TCGCCCGGGA GGCCCGGGTG CGGGTTTGCC TGTCCAACGC TTTCGGCTTC
GGTGGGCACA ACGCCACGCT GGTTTTTAGA AGGTACGAGG ACGGTGACCG GTAA
|
|---|
| Protein sequence | MRPRVVITGM GAITPLGTGL EVFWSALVAG RSGIRTIQSF DAGAFRTRIA GEVPDFEPTD
YIEKKEARRM DRYAQFAVAG AGMAIKDAGI ELDGLRRERA GVVIGSGIGG MHTFEEQARV
LFERGPDRVS PFFVPMMIGN MAAGQIALTY GLCGPNVTVV TACASGNHAI GDAFKVIQRG
DADVIITGGT EASITPLALA GFCAMKATSV RNDSPEQASR PFDAQRDGFV MSEGCGILVL
ESLEHALQRG APRIYAEVIG YGTSCDAYHI TAPDPEGLGA VRSMQAALRD AAVEPDEVDY
VNAHGTSTSL NDRVETLALK SVFGPAASKL AVSSTKSMTG HLLGAAGGLE AVICALVLQR
GVIPPTINYE HPDPECDLDY VPNIAREARV RVCLSNAFGF GGHNATLVFR RYEDGDR
|
|---|
| |