| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0631 |
|---|
| Symbol | |
|---|
| ID | 6027042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 670074 |
|---|
| End bp | 671018 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641593460 |
|---|
| Product | germination protease |
|---|
| Protein accession | YP_001716797 |
|---|
| Protein GI | 169830815 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01441] GPR endopeptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0537215 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGTCT GTGGTGTTGC GACCGATTTG GCCCTTGAAG CCCACGACGC CCTGCGGGCC
CAGACGGGCC GGGAAATCCC CGGTGTCGTG GTGGAACGCC GTGAGTTTCA GAACGGGAAG
GTCACCACAG TTAACATCAC CACTGAACAA GGAGCCCAGG CCATGGGCAA GCCCCCGGGT
ACTTACATTA CAATTGAAGC GCCGGCACTG CGGGTTACTG ATCCCGAAGC ACATACCGCG
ATAGTCCGGG AACTGGCCGA GGCCCTCAAA GGAATGATCC GCGTGAGCGA ACAAGGGAAC
ATCCTGGTGG TAGGGTTGGG AAACTGGAAC GCTACGCCGG ATGCCCTGGG TCCGCGGGTC
GCCAACCACA CGTTCGTAAC CAGGCACGTC TATCACTTCG CTCCGGAGCA TATCCCGGAG
GGAACCCGAG TGGTCAGCGC GCTTTCACCT GGGGTACTCG GGATCACCGG CATTGAGACG
GCCGAGATCA TCAAGGGCGT TGTCGAGCAC GTGCGGCCCG AACTTGTGAT CTGTATCGAC
GCTCTCGCCG CCGGCTCGGT CGAACGGATT GCCTCATCTA TTCAACTCTG TGACCGGGGA
ATCAATCCCG GGTCGGGAAT CGGCGGTCAG CGCCAGGGAC TCACCGAGGA GACTCTGGGT
GTGAAGGTCA TCTCCATCGG CGTGCCGACC GTCGTCCACG CCGCGTTTAT CGCCCGTGAC
GCCATCGTGA AGCTCTACGA GATACACGGA CGGACACCTC CGCAAACCGC CGAAATGGAG
GGGATCATCC AACAATTGCT CGAACCCTTT GGCGGACAGC TCATGGTCAC CCCAAAGGAA
ATCGACAATC TCATCAAAAA CTGCGCCCGT ATTATTGCCG GCGGGTTATC GGTGGCCTTG
CATCCCGGTA TCATACCGGA GCGTTTTGCC GACTACCTGC AATAA
|
|---|
| Protein sequence | MRVCGVATDL ALEAHDALRA QTGREIPGVV VERREFQNGK VTTVNITTEQ GAQAMGKPPG
TYITIEAPAL RVTDPEAHTA IVRELAEALK GMIRVSEQGN ILVVGLGNWN ATPDALGPRV
ANHTFVTRHV YHFAPEHIPE GTRVVSALSP GVLGITGIET AEIIKGVVEH VRPELVICID
ALAAGSVERI ASSIQLCDRG INPGSGIGGQ RQGLTEETLG VKVISIGVPT VVHAAFIARD
AIVKLYEIHG RTPPQTAEME GIIQQLLEPF GGQLMVTPKE IDNLIKNCAR IIAGGLSVAL
HPGIIPERFA DYLQ
|
|---|
| |