| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0629 |
|---|
| Symbol | |
|---|
| ID | 6027320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 667180 |
|---|
| End bp | 669330 |
|---|
| Gene Length | 2151 bp |
|---|
| Protein Length | 716 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641593458 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001716795 |
|---|
| Protein GI | 169830813 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3580] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.285219 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAACCG TAGGTTTGCC CAGAGCAATG GCTTATTACT ATATGTACCC TTTCTACGCC
GAGTTCTGCC GGGAAATCGG CGTGCAACTC GTGGTATCCC CGCCGACCAC CAAGCGGATC
CTGGAGAAAA TGGAATTTTG CCCGACCGAT GAGCCCTGTG TGGCGGTAAA ACTGCTGTTT
GCACACGCCC GCGAGTTGCT CGACCGCGGC GTCGACCGCC TTTTTATTCC CTGTTTGGTC
AGCTTGGAAC CCAAGAACTA CTGCTGTCCC AAATTCATAG GCATCCCGTA CATGGTCCAA
AACGCGCTCG AAAACGGCGC TCAGGTGTTG AGCCCGGTGG TTGACCTGTC ACAGGGGAAA
CGCCACTGGG AAAAGACATG GATCGAAACC GGTTTGCTTC TGGGTGCCGG CCCTGACCGT
ACCCGCCGCG CCCTCCAGGC CGGCTGGAAG GCCCAACGCC GTTTTGAAAC ATTGTGTGTG
GAAAAACGCC TGTCAACGCC AGACGCTTTC CGCATTCTGG ACTCCAAAGC TCCCCGGCGC
GGAGACGGCC AGGCGGCCGC CATGTCCGCG GAAGAAACGG TAGCCGTTAT CGGGCACCCC
TACATCCTGT TTGACGCTTT CAGCATGGAT CTGCTGCCTA AGTTCAAACA GTACGGCCGG
GTTCTAACCG CCGAGATGGT CCCCCCGGAA GAGATCCGCC GCCAGATGGA AACGGTGTCG
GAGGGTGAGC GGTTGTGGAG TTTTGAAGCC CAGCTTCTCG GCGCCGCCCT TCATTATCTC
CGGAATAACC TGGTGGATAA GCTGGTCCTG GTGGGTTCCT TTGAGTGCGG TCCAGAATCG
ATCATAGAAA ACTTCGTCGA GGAGGAAGCC GCCCGGCAGG GAATACCCTT CCTTCTCCTG
ACCCTCGACG AGCATACCGC CGACGCCGGA CTGACGACCC GGATCGAAGC GTTCATGGAC
GTCCAGCCGC TTCCATCCGG CGCTTCCGGA ACCATCCCCA AAGTGCAGGT TCCGGGACTA
CGTCCGGACC GGTTTGTGAT CGGCATGCCG ACCATGGGCC ATCTGGACCT GGCCATCCGT
TCCGCCCTGG CGGACTGCGG CGTGGATTCC ATCAGGACCC CCCACGCCAA CAAGGAGGTC
CTGGAGCTGG GCAAGGACCT GTCCCCCGAG TTCGTCTGCC TGCCGTTCAC CATCACCCTC
GGTCAAATGC GCTGGCTGTT GGAAAAAGGG GCCACCCACC TGCTCATGGT CGGCGGCAAG
GGCAAGTGCC GGCTGGGCTG GTACGCCCAG GTACAAGAAC AGTTGCTGCG CCGCCTGGGT
TACGAGTTCG AACTCATCGT CATCGACTCA CCCCTGCCGC TCCGGGAAAG ATGGTCGGAC
TTCCGCCAGA CCTTGAAGCG AACCACGAAT CAAGCCTCGT GGTTGCGGAT TTTGCGGGCC
CTGTACGCCG GCTACCACCG CATGGCCGCC ATCGACCAAG CCGAGAACAT CTGCCACCGG
GTGCGCGCTT TCGAAAGCAG GCCGGGAACG GTGGACCGGT TGTTCACCCA GTTTGTGCGC
CGCGTCGAGC GCGCCGCCTC CACCGAGTCG GTCTGGATGC TGATGAGCGA GTTCCGCGAC
CAAGCGGAAG CCATCGAAAC CGAGGATACC AACCCGGTCC GGGTCCGGAT CGTCGGTGAG
ATCTGGGTGG TGCTCGAAGC CCACATAAAC ATGCACCTGG AATCCCTGTT GGGCAAATCG
ACCGACCCCA GGGTCTGGGT AGATCGCGAG ATTTCGGTGA CCCAGTGGTT TCACAAGAAT
CTCTTCCCGA CCCGGGAGGC CACTGAACGG AAGAAGCAGA TTCAGCAGGC CGCGCTTCCC
TACCTGGGAA CCGACGTGGG CGGACACGGG CGTTTTAGCG TCGGGCTCAC CGCCCTGGCA
ACGCAGGAGG GGATCGACGG CATCATTCAC CTGATGCCTT TTACCTGTAT GCCCGAAATC
GTAGCCCAGA ATATTATGGT AAAACTGAGC GAGGAATTTG ATCTTCCTGT GCTAACCTTC
ATCATCACCG ACCAGACCGG TGAGGCGGGC TTTGAGACCC GGGTGGAAGC TTTCCTGGAC
ATCCTAAAAG ACCGCCGGAA TGGTCGTCTC AAGCTGGAGG AGGGAGCATA G
|
|---|
| Protein sequence | MVTVGLPRAM AYYYMYPFYA EFCREIGVQL VVSPPTTKRI LEKMEFCPTD EPCVAVKLLF
AHARELLDRG VDRLFIPCLV SLEPKNYCCP KFIGIPYMVQ NALENGAQVL SPVVDLSQGK
RHWEKTWIET GLLLGAGPDR TRRALQAGWK AQRRFETLCV EKRLSTPDAF RILDSKAPRR
GDGQAAAMSA EETVAVIGHP YILFDAFSMD LLPKFKQYGR VLTAEMVPPE EIRRQMETVS
EGERLWSFEA QLLGAALHYL RNNLVDKLVL VGSFECGPES IIENFVEEEA ARQGIPFLLL
TLDEHTADAG LTTRIEAFMD VQPLPSGASG TIPKVQVPGL RPDRFVIGMP TMGHLDLAIR
SALADCGVDS IRTPHANKEV LELGKDLSPE FVCLPFTITL GQMRWLLEKG ATHLLMVGGK
GKCRLGWYAQ VQEQLLRRLG YEFELIVIDS PLPLRERWSD FRQTLKRTTN QASWLRILRA
LYAGYHRMAA IDQAENICHR VRAFESRPGT VDRLFTQFVR RVERAASTES VWMLMSEFRD
QAEAIETEDT NPVRVRIVGE IWVVLEAHIN MHLESLLGKS TDPRVWVDRE ISVTQWFHKN
LFPTREATER KKQIQQAALP YLGTDVGGHG RFSVGLTALA TQEGIDGIIH LMPFTCMPEI
VAQNIMVKLS EEFDLPVLTF IITDQTGEAG FETRVEAFLD ILKDRRNGRL KLEEGA
|
|---|
| |