| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0602 |
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| Symbol | |
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| ID | 6025542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 640323 |
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| End bp | 641276 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641593431 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001716768 |
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| Protein GI | 169830786 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00243284 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTACCATT TGATTGACGG TTTCCTAGCC TACTTGCAGG CTGAGCGTCA AGCCTCGCCC
CGGACGATCA CCGCCTACCA GAAGGATCTT TTCGCCGGGC TCGATTACTT TGCGCGCCGC
CGGGGAAAAG CGGATGCCGA ACTCCGGGCG GGCGACATCG ACCTGAAATT GTTCCGGGGG
TACCTGGCGC ACCTCGGGCA ATCCGGCCTC GCCCGGAGCA CCATCGCCCG GAAGGTGGCG
GCCTGGCGCT CGTTTTTCCG CTACCTGGTC CGGGAAAACG CTGTGCCGGC GAGTCCTTTG
GCCGGGATGT CCGCGCCCCG GCTGAAGAAA CGGCTGCCGG GCGTACTGTA CCCGGAAGAG
GTCGGCACGC TGCTCGAGGC GCCGGACTTA AGCCCCACCG GGTTGCGGGA CCGGGCACTC
CTGGAGATGT TGTATGCCGG GGGCTTGAGG GTGTCGGAAC TGGTGGGGCT GGACCTGGCC
GACCTGGAAC TGAAACAGGC GTACGTCCGA GTGCTGGGGA AAGGGAACCG GGAAAGGCTC
TTACCCCTGG GGGGATACGC TGTGGAGGCC CTCAAGCGGT ACCTAGCCGA GGGGCGGCCG
AAGCTTCTTG GCGGGAAAAA GACCACCGCA GCGCTCTTTC TGAACTACCG GGGCGAAAGG
CTGACCGACC GGGGCGTGCG GCTTGTTTTC ACCAACTACC TGAAGGGTTT GGCGTCCGGG
GTACCCGGGG GTACCCGCTT TAGCGGGTCA GCGGATCGGC AGGCCGGCCC CCACCTGCTC
CGGCACTGCT TTGCGACCCA CCTTCTGGAG GCAGGCGCGG ATTTGCGCAC GGTCCAGGAA
CTCCTGGGCC ACGCCCGCCT GTCGACCACC CAGATTTACA CCCGGGTTTC GGCCGACCGC
CTGCTGGAGG TGTACCGGCG GGCGCACCCC CGCGGCCGGA GCCGCAAGGA CTAA
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| Protein sequence | MYHLIDGFLA YLQAERQASP RTITAYQKDL FAGLDYFARR RGKADAELRA GDIDLKLFRG
YLAHLGQSGL ARSTIARKVA AWRSFFRYLV RENAVPASPL AGMSAPRLKK RLPGVLYPEE
VGTLLEAPDL SPTGLRDRAL LEMLYAGGLR VSELVGLDLA DLELKQAYVR VLGKGNRERL
LPLGGYAVEA LKRYLAEGRP KLLGGKKTTA ALFLNYRGER LTDRGVRLVF TNYLKGLASG
VPGGTRFSGS ADRQAGPHLL RHCFATHLLE AGADLRTVQE LLGHARLSTT QIYTRVSADR
LLEVYRRAHP RGRSRKD
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