| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0601 |
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| Symbol | |
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| ID | 6027014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 639004 |
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| End bp | 640323 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641593430 |
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| Product | tRNA (uracil-5-)-methyltransferase Gid |
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| Protein accession | YP_001716767 |
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| Protein GI | 169830785 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00421196 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGGTG GGGTCATTGT GGTGGGGGCC GGGCTGGCCG GGGCGGAGGC AAGCTGGCAA
CTGGTCCGGC GCGGCGTTCC CGTAGTCCTG TACGAGATGC GCCCCCGGAA ATGCACCCCG
GCTCACAAAA CCGGGGATTT CGCCGAACTG GTCTGCTCCA ATTCCCTCCG GGCGGAGGCG
CTCACGAATG CGGTCGGCCT GCTCAAAGAG GAGATGCGCC GGCTCGGTTC TCTGATCATG
GCCTGTGCCG ACGCGCACCG GGTGCCTGCG GGCGGAGCTC TGGCCGTGGA CCGGCAACTG
TTCGCCGCGG CGGTTACCGA AAGGCTCACC AGCCACCGCC TGGTGACCGT CTGCCGGGAG
GAAATCACCA CTATTCCCAC CGCAGAACTG GTGATCCTGG CCACCGGGCC CCTGACTTCC
GACGCTCTGG CGGACGAGCT TCGCCGGTTG ACCGGGCAGG AACACTTGTA TTTCTTTGAT
GCGGTGGCCC CGATCGTCAC CCTGGAATCC ATCGATCAGG ACCGGGTCTT CCGGTCCTCC
CGTTACGGCC GCGGTGATCC GGCCTATCTG AACTGCCCCA TGTCGCGGGA GGAGTACGAA
CGGTTTTGGG AGGCGCTGGT GGCCGCCGAA CGGGCGACGC GGCACACCTT CGAACGGGAA
ACCCACTTTG AAGGCTGCCT GCCGGTGGAG GTGATCGCCG CCCGGGGCCG TGAAACGCTG
CTTTACGGAC CGCTTAAGCC GGTGGGACTG GTCGATCCCC GCACGGGGGA GCGGCCGTAT
GCCGTGGTCC AGCTCCGTCA AGACAACCGG GCCGGTACCC TCTACAACCT AGTCGGGTTC
CAGACCAACC TTAAATGGGG GGAGCAGCGC CGGGTGTTCT CGATGATCCC GGGGCTGGAG
CAGGCCGAGT TTGTACGCTA CGGTGTGATG CACCGGAACA CGTACATAAA CGCGCCGGTC
TTGCTGTCCC CCAACCTGAT GTTGAAGAGC CGGCCCGGGC TTTTTATCGC CGGGCAGTTG
AGCGGGGTGG AGGGTTACGT CGAGTCGGCG GCCGCCGGTC TGGTAGCTGG CCTGAACGCG
GCGCGGTTGT ACAAGGGCCT GGAGCCCCTG GTTTTTCCGC CCGAGACGGC GCACGGGGCC
CTTATCAACT ACATAGTGAC CGCCGACCCT GCTAATTTCC AGCCGATGAA CGTGAACTTC
GGGCTGTTTC CACCCCTGCC CGGAAAGCGC GTCCGGCGCC GGCCGGAACG CAACCTGGCC
CACGCGCAGC GCGCCCTGGA ACGTCTGGCG GCTTGGCTGA CCGAAAAGGG GGAAGGTTAG
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| Protein sequence | MSGGVIVVGA GLAGAEASWQ LVRRGVPVVL YEMRPRKCTP AHKTGDFAEL VCSNSLRAEA
LTNAVGLLKE EMRRLGSLIM ACADAHRVPA GGALAVDRQL FAAAVTERLT SHRLVTVCRE
EITTIPTAEL VILATGPLTS DALADELRRL TGQEHLYFFD AVAPIVTLES IDQDRVFRSS
RYGRGDPAYL NCPMSREEYE RFWEALVAAE RATRHTFERE THFEGCLPVE VIAARGRETL
LYGPLKPVGL VDPRTGERPY AVVQLRQDNR AGTLYNLVGF QTNLKWGEQR RVFSMIPGLE
QAEFVRYGVM HRNTYINAPV LLSPNLMLKS RPGLFIAGQL SGVEGYVESA AAGLVAGLNA
ARLYKGLEPL VFPPETAHGA LINYIVTADP ANFQPMNVNF GLFPPLPGKR VRRRPERNLA
HAQRALERLA AWLTEKGEG
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