| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0596 |
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| Symbol | |
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| ID | 6027386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 632689 |
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| End bp | 633621 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641593425 |
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| Product | ATP dependent DNA ligase |
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| Protein accession | YP_001716762 |
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| Protein GI | 169830780 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.360914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACAA AGTTTTCGCC CATGGAGCCT GTTTCCTGGC CGGCGCCGTT CAATGACCCG
GGTTTTGTGC ACCAGTTGAA ATGGGACGGC ATCCGGATCA TTGCGGAGGT CCGGGGGGAC
GAGGTGGTGC TCCGTACGCG CCGGGGCGGG GTGCGGACCG AGACCTACCC CGAGCTTCGC
GTGCTCAGCA GGATCCTGAA GGGGGAAGCG GCCGTTCTGG ACGGCGAAGC GGTGGTCCTC
GATGAGGAAG GTTGTCCGAG CTTCGGGCGG ATTCTGCGGC GCGACCAGAC CCGCAGAGTG
ACGGCCGCCT TGAGGCGGGA CCTGCCGGTG CAGTACGTGG TGTTTGACGT TTTGCTTCTT
GACGGGGAAT CACTGCTGGA TCGGCCCTTT ACGGAGCGGC AGGAAATCCT GGCGGGGATT
CTGCCGGAAG AGGCGCCGGT GGCGATTTGC CGGAGTCTCC CGGACGGCGT GGAACTGTTC
AAAGCCACGG GCCGCCTTGG ACTGGAGGGG ATTGTGAGTA AAGAGCTGGC CGGCCGGTAC
CACCCGGGGC GTAAACACCC CACCTGGCGC AAGGTGAAGC ATTTCCGCCG GTTGGAGGCG
GTGGTGGGCG GTGTCGTGTT GAAGCGGGGA CGGGCCAACG CCCTGCTGCT CGGTCTTTAC
TCCGGCCGGA ACCTGGTCTA TATCGGCCGG GCCGCCACCG GACTTTCGGA GAGGGACCTG
ACGGTTTTGA CCGGAATGGC CCGCACCCAC GCCGCCGGCC GTTCCCCGTT CAAGAACACA
CCCGCGGCTG GCCGGGGCCT GGAGGTTGCC TGGCTCGAGA CGCCCCTGAC GGCACGCGTG
CGGTTCATCG GCTGGACCGA TCAGGGGCGG CTGCGGAACC CGGTGCTCGA AGGCTTCAAC
GACCAGGCGG CCGGGGACTG CGTTTTCCCT TAG
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| Protein sequence | MNTKFSPMEP VSWPAPFNDP GFVHQLKWDG IRIIAEVRGD EVVLRTRRGG VRTETYPELR
VLSRILKGEA AVLDGEAVVL DEEGCPSFGR ILRRDQTRRV TAALRRDLPV QYVVFDVLLL
DGESLLDRPF TERQEILAGI LPEEAPVAIC RSLPDGVELF KATGRLGLEG IVSKELAGRY
HPGRKHPTWR KVKHFRRLEA VVGGVVLKRG RANALLLGLY SGRNLVYIGR AATGLSERDL
TVLTGMARTH AAGRSPFKNT PAAGRGLEVA WLETPLTARV RFIGWTDQGR LRNPVLEGFN
DQAAGDCVFP
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