Gene Daud_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0560 
Symbol 
ID6027160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp599139 
End bp599957 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content64% 
IMG OID641593396 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001716733 
Protein GI169830751 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGTAA TAAAGCTCGG TATCTGTCAG ATGCCGGTGA CCGCGAGCAA GGAGCAAAAT 
CTGAGCCGGG CCCGTCAAAT GGCGGCTGAA GCCGCGCGGG CCGGGGCCCG GGTCGTGGTG
CTGCCTGAAA TGTTCAACTG CCCCTACCAG CACGAGTTCT TCACCCGCTT CGCCGAAACC
TGCCCGGACG GGGATACCTT CCGAATGCTG ACCAGCACCG CCCGGGAGTT GGGCGTGTAC
CTGATCGGCG GCTCAATTCC GGAAGCGGAG GACGGGCGCA CCTACAACAC CTGCTTCGTC
TACGGCCCCG ACGGGCGGAT GCTCGGCCGC CAGCGCAAGC TGCACCTGTT CAACATTGAG
ACGGATGACC TGGTTTTCCG GGAATCGGAC ACCCTGTCCC CCGGAACCGG TCCGCCCACC
GTCTTTGTCA CGCCCCTGGT CACTTTCGGC GTGGCCATCT GCTTCGACCT CCGGTTTCCA
GAATTGTTCC GGGACCTGGC GGCACGCGGT GCGGAGCTGA TTGTCGCCCC CGCCGCCTTC
AACACCTTCA CCGGCCCTCC GCACTGGGAG TTGCTGCTGC GGGCCCGGGC CGTCGATAAC
CAGGTGTTTG TGGCCGGCGC CGGCCCGGCC TGGACGGAGG ACAGTCCGTA CCCCTACTAC
GGCCATTCGC TGGTCGTGAA CCCCTGGGCT GAGGTAATTG CCTGCGCCGG TGAGCGGGAG
ACGGTGCTCC TGGCCGAGAT AGACTTGGGC CAGGTCGCGG AGGTTCGGAA AAAGCTGCCC
CTGCACCGGA CCGAAAAGTC TACCTTAATT AAATTTTAG
 
Protein sequence
MGVIKLGICQ MPVTASKEQN LSRARQMAAE AARAGARVVV LPEMFNCPYQ HEFFTRFAET 
CPDGDTFRML TSTARELGVY LIGGSIPEAE DGRTYNTCFV YGPDGRMLGR QRKLHLFNIE
TDDLVFRESD TLSPGTGPPT VFVTPLVTFG VAICFDLRFP ELFRDLAARG AELIVAPAAF
NTFTGPPHWE LLLRARAVDN QVFVAGAGPA WTEDSPYPYY GHSLVVNPWA EVIACAGERE
TVLLAEIDLG QVAEVRKKLP LHRTEKSTLI KF