Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0556 |
Symbol | |
ID | 6027273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 595490 |
End bp | 596422 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641593392 |
Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
Protein accession | YP_001716729 |
Protein GI | 169830747 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGTGC CGCCCCCGCT GGTCGTAATC ACCGGACCCA CGGCCACGGG GAAAACCGAA GTCGGCATCA ATGTCGCCCT GGCCTGCGGC GGAGAGATCG TTTCGGCCGA TTCGATGATG GTCTACCGGG GGATGGATAT CGGCACGGCC AAACCGTCCG CTTCCGAGAT GCGGGGTGTA CCGCACCACC TGATCGACGT CGTGGACCCG GATGAGGAGT TCAATGTGGC GCGGTACCAG CAACTGGCCG GGGAGGCAAT AGTCGGTATT CTCGGGCGGA AACGGGTTCC GCTGCTGGTC GGCGGCACGG GCCTTTACAT CCGGTCGGTG GTCGAAGACT ACCGGTTTCC GGTACGGGCC GACCGGCGGC TTAGAAACAG ATTGCAGGAA GCGGCCGAGC TTTACGGGTG TGCGCGCCTG CACCGCCATC TGGCGGTGGT CGACCCCGTT ACCGCCCGTC GGCTGCATCC GAACGACCAG CGCCGGATCA TCCGCGCTCT GGAGGTGTAC TACCAGTCGG GGATCCCCTT CAGCCGCTAT CCGGACCGGC GGGACAGGGC GCCGAAGTAC CTTCCGGTCA TGTTCGGGCT GAACATGGAA CGGGGCCGGC TCTACCGGCG GATCGAAGAC CGGGTCGACG CCATGATCCG GGCGGGGCTG GTGCGGGAAG TACAGTCCCT GCTGGAAAAG GGTTACGGTC CCGAACTAGT GGCGATGAAG GGGTTGGGCT ACAAGGAAAT CGCGGCCCAT CTCCGCGGGA GTCTAACACT TGAGGAAGCG ATCCATATAC TGAAGAGAAA CACCCGCCGG TTCGCCAAAC GCCAGCTGAC CTGGTTCCGG AGAGACGAGC AGATTCGCTG GCTGGACGTG GAGGAATGCG GCGGCCCGGT GGGAGCGGCC CGAGAAATTG TTGGTTCTAT TGAGCAGGAG TAA
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Protein sequence | MTVPPPLVVI TGPTATGKTE VGINVALACG GEIVSADSMM VYRGMDIGTA KPSASEMRGV PHHLIDVVDP DEEFNVARYQ QLAGEAIVGI LGRKRVPLLV GGTGLYIRSV VEDYRFPVRA DRRLRNRLQE AAELYGCARL HRHLAVVDPV TARRLHPNDQ RRIIRALEVY YQSGIPFSRY PDRRDRAPKY LPVMFGLNME RGRLYRRIED RVDAMIRAGL VREVQSLLEK GYGPELVAMK GLGYKEIAAH LRGSLTLEEA IHILKRNTRR FAKRQLTWFR RDEQIRWLDV EECGGPVGAA REIVGSIEQE
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