Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0540 |
Symbol | |
ID | 6027661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 578324 |
End bp | 580033 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641593376 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_001716713 |
Protein GI | 169830731 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGCG AAGTCATCAA AAAGGGCGTG GAGCGCGCCC CGCACCGCAG CCTGCTGCGG GCCACCGGCA TCATTAAAGA CGAAGCGGAT TTCCAGAAAC CTTTTGTGGC CATTGCCAAT TCCTTCGCCG AAATCGTGCC GGGACATGCC CATCTGAACG AATTTGTCAA GGAAATTAAA GAAGCGGTGC GGGAAGCGGG GGGCGTTCCT TTTGAGTTCA ACACCCTGGC CTTGTGCGAC GGCATTGCCA TGAATCACCC CGGCATGCGC TACAGCCTGC CTTCCCGGGA ACTGGTCGCC GACAGTGTGG AAACAATGGT GCAAGGCCAC CGGTTTGACG GCCTCATCTG TATCCCCAAT TGCGACAAAA TCGTGCCCGG CATGTTGATG GCGGCCGTGC GGCTCAATAT CCCCACCATC TTTGTCTCCG GCGGCCCGAT GAAAGCCGGG CGGGCCAAGG ACGGCCGCCC GATAGACCTG ATTTCTGTCT TTGAAGGGAT CGGGGCTTTC CGCGCCGGCA AGATCGATGC AGGCGACCTG TTGGAGCTGG AGCAGGCCGC CTGTCCCGGT TACGGCAGCT GCGCCGGCAT GTTTACCGCC AACTCCATGA ACTGCCTCTG TGAGGCCTTG GGCCTGGCTT TGCCCGGCAA CGGCACCATT TTAGCCGTCG ACCCGAGAAG AAGTGAGCTG AAAAAGTGGG CCGGGCGCCA AATTGTAGAG CTGATTAAAC GGGATCTCCG GCCACGGGAC ATCGTCACCC CGGAGGCGAT TGATAACGCC TTTGCCCTGG ACGTAGCCAT GGGCGGCTCT ACCAACACCA TATTGCACCT TCTGGCTGTC GCCCAGGAGG CAGGAATAAA CTACCCCCTT AAACGCGTCA ACCTGATATC CGCCCGTACG CCCACCCTCT GCAAGATTTC TCCGGCCTCA AGCTTGCACA TCGAAGACGT GGACCGCGCC GGCGGCGTCA GTGCCGTATT GGGCGAGCTA TCCCGCAAGC CCGGCCTGCT CAACCTGGAC TGCCTGACGG TTACCGGAGA AACTTTGGGG GAAACCGTAG GCCAGGTCCA AAGCCTTGAC CCGCGAGTCA TTCGCGGCGT AGAGGAGCCG TTGAGCCCCG TGGGGGGGTT GAAGGTCCTT TTCGGCAGCC TGGCGCCGGA GGGGGCAGTG GTGAAGACGG CGGCGGTGGT GCCGCAGATG ATGCGCCATC AGGGGCCGGC GGTAGTCTTC AATTCGGAGG CGGAGGCTTC TGCCGCCATC CTGGGTGGGC GCATCAAGCA TGGCGATGTT GTAGTCATCC GCTTTGAGGG GCCGAAAGGC GGTCCCGGCT TTATGGAGAT GCTGGGCCCC ACGGCGGCGC TGGTGGGGAT GGGGTTAGGT GAGTCGGTAG CGCTAGTTAC CGACGGCCGC TTCTCCGGCG GCACGCGGGG TGCCTGCATC GGCCACGTCT GCCCCGAAGC CGCCAGCGGC GGCCCCATTG CCCTGATCAA GGACGGCGAT CTGATCTCTT ATGACCTGGA AGCGGGCACG CTGGAGCTGC TGGTGCCGCA GGAAGAGCTG GCCGCCAGAA AGGCGGCCTT TACGCCGCCG CTCAGGCAGG GACTCACCGG CTGGCTGGCC AGGTACGTCC AGATGGTTGC TCCGGCCAGT ATCGGCGCCG TGCTGCGTCC TGCATGCGGC AGGCCGCCTG GGGAACAAGA CTACGAATAA
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Protein sequence | MNSEVIKKGV ERAPHRSLLR ATGIIKDEAD FQKPFVAIAN SFAEIVPGHA HLNEFVKEIK EAVREAGGVP FEFNTLALCD GIAMNHPGMR YSLPSRELVA DSVETMVQGH RFDGLICIPN CDKIVPGMLM AAVRLNIPTI FVSGGPMKAG RAKDGRPIDL ISVFEGIGAF RAGKIDAGDL LELEQAACPG YGSCAGMFTA NSMNCLCEAL GLALPGNGTI LAVDPRRSEL KKWAGRQIVE LIKRDLRPRD IVTPEAIDNA FALDVAMGGS TNTILHLLAV AQEAGINYPL KRVNLISART PTLCKISPAS SLHIEDVDRA GGVSAVLGEL SRKPGLLNLD CLTVTGETLG ETVGQVQSLD PRVIRGVEEP LSPVGGLKVL FGSLAPEGAV VKTAAVVPQM MRHQGPAVVF NSEAEASAAI LGGRIKHGDV VVIRFEGPKG GPGFMEMLGP TAALVGMGLG ESVALVTDGR FSGGTRGACI GHVCPEAASG GPIALIKDGD LISYDLEAGT LELLVPQEEL AARKAAFTPP LRQGLTGWLA RYVQMVAPAS IGAVLRPACG RPPGEQDYE
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