| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0537 |
|---|
| Symbol | |
|---|
| ID | 6027037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 574077 |
|---|
| End bp | 574865 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641593373 |
|---|
| Product | TatD-related deoxyribonuclease |
|---|
| Protein accession | YP_001716710 |
|---|
| Protein GI | 169830728 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1099] Predicted metal-dependent hydrolases with the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGGAA TTGTAGATTC TCACACACAC GTTTCGTTGC TTCCGTACGA AGGGCTGGAA
AACATGGCCC TGGCCGGGGT GAAAAAGATT ATCGGCTGTG CCATATTTTT TGGGGCAAAG
CATGCGGAAA CACTCTTTGA CCATTTCCAC CAAATGTCAA CCCTTTCGGT GAAGAATGCT
GCCGAAAATG GCATCAAGCT TTTCCTCGCA GTCGGCATTC ACCCCATGGG GACACCGGAA
GACTGGCCCA GGGTGATCGA CGCCCTCCCA GGCTACTTGA AGATGAATGA CGTCGTCGGC
TTAGGAGAAA TCGGCCTGCA TGAGGGAAGC CGGCGGGAGC AGGACGTGCT AAAGGAGCAA
TTGAAGGTAG CCAAGGAACA CAGAGTACCG GTAATCCTTC ACACCCCGCC ACAGGACAGG
GTGAAGATAA CCAACAAGAC GATTGAAATT GCCGCCGCCG TCGGGATGGA GCCCGGAAAA
GTGATCATCG ACCACGCCAA TTTGGATATT ATTCACTTAA TCGAGGACTT TGGGGCCGTT
CCCGGGCTCA CCATTCGCCA AGAAGGACTT ACGCCCCATC TGTTGCTGAA CCACCTGGAA
CGTTTCCAGC GAGGGGTGCT AAACAGCGAT TACAGCAACC TCAAACCCAA CGACCCCCTG
AGCGTTCCGA AGGCTGTGCG GTATCTGGAG CTGAACGGGG TCCCCCTGGA AATCATTGCC
CGGATTGCAA GATACAATGC GGAGAAAGTT TTCGGCATTC AAACGACCGG CAGCACGACT
CATTACTAA
|
|---|
| Protein sequence | MEGIVDSHTH VSLLPYEGLE NMALAGVKKI IGCAIFFGAK HAETLFDHFH QMSTLSVKNA
AENGIKLFLA VGIHPMGTPE DWPRVIDALP GYLKMNDVVG LGEIGLHEGS RREQDVLKEQ
LKVAKEHRVP VILHTPPQDR VKITNKTIEI AAAVGMEPGK VIIDHANLDI IHLIEDFGAV
PGLTIRQEGL TPHLLLNHLE RFQRGVLNSD YSNLKPNDPL SVPKAVRYLE LNGVPLEIIA
RIARYNAEKV FGIQTTGSTT HY
|
|---|
| |