Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0506 |
Symbol | |
ID | 6027104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 546773 |
End bp | 549784 |
Gene Length | 3012 bp |
Protein Length | 1003 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641593347 |
Product | hypothetical protein |
Protein accession | YP_001716684 |
Protein GI | 169830702 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1743] Adenine-specific DNA methylase containing a Zn-ribbon |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.967914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCCCA AAGAGTGTAA ACGGCTGGCG GAGGTAGACT TTCCGATTGC CGAGGTATCG AAGCACTCGG TGCGGGAGAA GTCTATTCGT CATGGGCACC CGAGTACGCT GCACCTGTGG TGGGCCAGAC GGCCGCTTGC GGCGTGCCGG GCGATGCTCC TGGGGCTGCT TCTGCCCGAT CCTGCCGATC CCTTTTGCCC CGGCGCTTTT AAGGTACAGG TTCGCCGGAT TCTCTCGCGT CTTTACCAGG GGGCGGCAGA CGCCTCAGAT GCGGACCTGC GGCGCTGGCT GCTCAAGTTC ATCGGCGACT TTGCCAACTG GGATCTTTCA ACGGATCAGG GTTACCTCCA GGCCGGTAGG GACTTGGTTA AAGCGGCCCA CGGTGAGGAA CCGCCGCTTG TCGTTGACCC CTTTGCGGGC GGCGGGTCGA TCCCACTTGA GGCGCTGCGG CTGGGCTGCG ACGCCTTCGC CAGCGATCTT AACCCGGTGG CCTGTCTGAT TTTGAAGGTA ATGCTGGAAG ACATTCCCCG CTACGGGCCT GAGCTGGCTG AGGAACTGCG CCGCGTCGGG GCAGAGATCA AGAAGCAGGC TGAAAAGGAA CTGGCGGAAT TCTACCCGAA AGACTCCGAT GGGGCCACGC CCATCGCCTA CCTCTGGGCG CGGATAGTAA AATGCGAGTC GCCCAACTGC GGCGCGGAGA TCCCGCTGGT GCGCTCCTTT TGGCTCTGTA AGAAGGCGAA CCGCAAGCGG GCGCTCCGGT ATAAGGTAGT CTGCTCCGGG AACGAATCGC CAGCCATAGA ATTTGAAATC TTTGAACCCA AGACGGATAA GGAAGTTTCC AACGGCACAG TGACGCGCGC CAAGGCCACA TGCCCGGCCT GTCACATTGT TCTTCCGCCG GAGCGGGTGC GGGCACAGCT ATCCGAGCAA CGCGGCGGCG CGGATGTGCT CTTTGACGCG AAGAGAAACC GGGTCGGCGG CGCGCGGCTA CTCGCTGTGG TGACCCTCAA GCCCGGCGAG CAGGGCCGCC ATTACCGCTT GCCCACCGAG CGCGACTATC AGGCAGTTTG GAACGCGCAG AAGCGGCTGA AAGCGATCCT TGACGAGTGG GAGCGTAGCG GTAGGAAAGG TCTTTGTCCG GTGCCGGATG AGCCGTTGCC GCTGATGAGC GGAACGTTCA ACGTGCCGAT CTACGGCATG AGCCGGTGGG GCGACCTCTT TGCCGCGCGA CAGAAAGCGG CGATGCTGAC ACTAGCGACA CTAATTGAGC GAGTGGGGCG CGAAGAAACT ACGGGCGTCC TCAGGGAGGT CCTATCGCTG TCTCTCGGTA AGGTCCTTCG TCACTGCAAC GTGGTTAGCA AGTGGCACCG AGGAAGTGAG ACTGTCGCTG GTGCATTCGG GATACAGGCG CTTCCAATGT CTTGGGACTT TCCGGAGATG TTCCCGCTAG TCGATTACGC CGGGGGACTG AGCGATGCGC TTGAGGATGT GAATGAGGCA GTTTCGGCAG TTGCGACGGC GGCAGGTTCG GTCGGGCAGA TCGAGATCGC AGATGCGGCA GAGCATCCGC TGCCCGACGT AACGGTCTCA GTGTGGTTCA CCGATCCGCC GTACTATTTT GCGATCCCAT ACGCCGATCT GTCTGATTTC TTTTTCGTAT GGCTGAAGCG TGCGCTTCCA AGGCACCCTG GATTGGTCGA TCGTTTCGAT CCAGGCAATC CGCTCACCCA CAAGAACCGT GAGCTGTGCG AAATGGCGCA TTGGGACCCT GACCGATACG CTCACAAGAA TCAGAAGTTT TTCGAGGAGG GCATGAGGGC CGCGTTCGCT GAAGGTCGCC GTGTCTTACG CGAGGATGGT GTGGGCTGTG TAGTGTTTGC TCACAAGACT ACGGAGGGGT GGGAAGCGCT TCTGTCGGGG ATGAGCCAAG CCGGCTGGAC GATTACGGGA TCATGGCCTG TCGCAACGGA AAGAGGTGCA CGACTGCGCG CGCGCGAATC CGCGGCCCTT GCCACCAGCG TTCACCTCGT CTGCCGCCCC CGCCCGGAAA ATGCGCCCGT GGGCGACTGG GCCGACGTCC TGCGCGAGCT GCCTAAGCGG GTCGGGGACT GGATGGAGCG CCTCCAGTCC GAAGGAATAC GCGGTGCGGA CCTTGTCTTT GCCTGCATCG GCCCGGCGTT GGAGATTTTC AGCCGGTACA GCCGCGTCGA GACCGCGGAC GGCAGAGAAG TTAAACTTGC CGAATACCTG GAAAAGGTCT GGGAGGTCGT GGGCCGCACT GCTTTGGAAC AGGTTCTTGG GACTGCTGAA GCTATGGCCC GCAACAGCGC AGTCGGGGCT CTCGAAGAAG ACGCGCGTCT TACGGCGCTC TTCCTCTGGA CACTCCAGAG CACCAATGGC AATGCGGCAG ACATCGGTGC CCAGGAAGCT GAAGAGGGAG AGATTTCCGA TGAGGACGAT GAAGAGGAGA CCACCCCACA TCGCAAAGCG AAGGGATATA CCCTCATTTT CGACGTTGTG CGCCGGTTTG CCCAGCCTCT CGGGATCAAT TTGCCTAAAT GGGAAGGCCG GATCATCGAA ACGAAAAAGG GTATTGTGCG GTTGCTTCCG GTCGTCGAGC GGGCAAAGCA GCTTTTCGGT GAAGACGGGG CAAAGGTGAC CGCAGACTGG ATCGAACACA ACTCGCAAAA GAATTTGCAG TTAGTGCTTT TTCCGGAACT TGAAGAGCAG CGTGCTCCGA GGGTTCGCAG ACGTAGCCGC GGAAAGATAT CGGTCACCCC GTCTGCCGTG GAGGGTAACG CCAAGCAGGA GGCGACTACG CTCGACCGGG TACACGCCGC GATGCTGCTT CAGGCCGGCG GCCAGACTAA CGCTTTACGG GCGCTCATCA AGGCCGAGCA GGAACGCGGC CCCGACTTTC TACGCCTGGC GAATGCGTTA TCGGCGCTCT ACCCTAAGGG GAGCGAGGAG AAGCGCTTGC TTGACGCTAT GCTGTTGGCC GTGTCGAGGT AA
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Protein sequence | MIPKECKRLA EVDFPIAEVS KHSVREKSIR HGHPSTLHLW WARRPLAACR AMLLGLLLPD PADPFCPGAF KVQVRRILSR LYQGAADASD ADLRRWLLKF IGDFANWDLS TDQGYLQAGR DLVKAAHGEE PPLVVDPFAG GGSIPLEALR LGCDAFASDL NPVACLILKV MLEDIPRYGP ELAEELRRVG AEIKKQAEKE LAEFYPKDSD GATPIAYLWA RIVKCESPNC GAEIPLVRSF WLCKKANRKR ALRYKVVCSG NESPAIEFEI FEPKTDKEVS NGTVTRAKAT CPACHIVLPP ERVRAQLSEQ RGGADVLFDA KRNRVGGARL LAVVTLKPGE QGRHYRLPTE RDYQAVWNAQ KRLKAILDEW ERSGRKGLCP VPDEPLPLMS GTFNVPIYGM SRWGDLFAAR QKAAMLTLAT LIERVGREET TGVLREVLSL SLGKVLRHCN VVSKWHRGSE TVAGAFGIQA LPMSWDFPEM FPLVDYAGGL SDALEDVNEA VSAVATAAGS VGQIEIADAA EHPLPDVTVS VWFTDPPYYF AIPYADLSDF FFVWLKRALP RHPGLVDRFD PGNPLTHKNR ELCEMAHWDP DRYAHKNQKF FEEGMRAAFA EGRRVLREDG VGCVVFAHKT TEGWEALLSG MSQAGWTITG SWPVATERGA RLRARESAAL ATSVHLVCRP RPENAPVGDW ADVLRELPKR VGDWMERLQS EGIRGADLVF ACIGPALEIF SRYSRVETAD GREVKLAEYL EKVWEVVGRT ALEQVLGTAE AMARNSAVGA LEEDARLTAL FLWTLQSTNG NAADIGAQEA EEGEISDEDD EEETTPHRKA KGYTLIFDVV RRFAQPLGIN LPKWEGRIIE TKKGIVRLLP VVERAKQLFG EDGAKVTADW IEHNSQKNLQ LVLFPELEEQ RAPRVRRRSR GKISVTPSAV EGNAKQEATT LDRVHAAMLL QAGGQTNALR ALIKAEQERG PDFLRLANAL SALYPKGSEE KRLLDAMLLA VSR
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