| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0492 |
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| Symbol | |
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| ID | 6026274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 531727 |
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| End bp | 532809 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641593332 |
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| Product | RNA polymerase sigma factor RpoD |
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| Protein accession | YP_001716670 |
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| Protein GI | 169830688 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.187427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGGAAG AAGCGACGAA CTTTATCCAG GACCTCGTTG AAAAGGGCAA GCAGCGCGGC
ACGCTGACTT ATAACGAGGT GATGGACAGT CTGCAGGGGT TTGAGCTTAC CCCCGACCAA
ATCGACGATG TGTACGAAAG ACTGGCCGGA GAGGGGATCG AGGTAGTGCC GGAAGGTCCT
GACCTGGCGG CCCTGGAGGA AGAGACACGC GAGGAAGATG TGGAGGAAGC TGAAATCGCG
ATCCCCGAAG GCGTTGACAT AGACGATCCG GTACGGATGT ACCTGAAAGA GATCGGGCGC
ATCCCGCTGT TGACTCCGGA GGAAGAAGTA TCCCTCGCCA GGCGCATGGA GGCCGGTGAC
GACGAGGCCA AGCGGCGCCT GATCGAGGCC AACCTGCGCC TGGTGGTCAG CATCGCCAAG
CGCTATGTGG GCCGGGGTAT GCTGTTTCTC GACCTGATCC AGGAGGGAAA CCTCGGTCTG
ATCAAGGCCG TCGAGAAGTT TGACTACAAG AAGGGCTACA AGTTCAGCAC CTACGCCACC
TGGTGGATCC GGCAGGCCAT CACGAGGGCC ATTGCCGACC AGGCCCGGAC GATTCGGATT
CCGGTACACA TGGTCGAGAC CATCAACAAA CTGATCCGCA TTTCCCGGCA GCTTTTACAG
GAGCTCGGCC GCGAGCCGCT GCCCGAGGAG ATCGCCCGGG AAATGGACAT CTCGGAGGAC
AAGGTGCGCG AGATCCAGAA GATCGCGCAG GAGCCGGTGT CCCTCGAAAC CCCGATCGGG
GAGGAAGAGG ACTCGCACCT GGGAGACTTC ATTGAGGACC AGGACGCTCA GGCACCGGCC
GAGGAAGCTT CCTTTACCTT GCTCCGGGAG CAGCTGGACG ACGTTTTGAA GACCCTGACC
GAAAGGGAGC AGCGGGTGCT GCGGTTGCGG TTCGGCCTCG ACGACGGCCG GGCGCGTACT
CTGGAAGAGG TCGGGCAGGA ATTCGGGGTG ACCCGGGAGC GCATCCGGCA GATCGAAGCC
AAGACCCTCC GGAAGCTCCG ACACCCCAGC CGAAGTAAGA AACTGAAGGA CTACCTGGAC
TAG
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| Protein sequence | MKEEATNFIQ DLVEKGKQRG TLTYNEVMDS LQGFELTPDQ IDDVYERLAG EGIEVVPEGP
DLAALEEETR EEDVEEAEIA IPEGVDIDDP VRMYLKEIGR IPLLTPEEEV SLARRMEAGD
DEAKRRLIEA NLRLVVSIAK RYVGRGMLFL DLIQEGNLGL IKAVEKFDYK KGYKFSTYAT
WWIRQAITRA IADQARTIRI PVHMVETINK LIRISRQLLQ ELGREPLPEE IAREMDISED
KVREIQKIAQ EPVSLETPIG EEEDSHLGDF IEDQDAQAPA EEASFTLLRE QLDDVLKTLT
EREQRVLRLR FGLDDGRART LEEVGQEFGV TRERIRQIEA KTLRKLRHPS RSKKLKDYLD
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