Gene Daud_0485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0485 
Symbol 
ID6026268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp523856 
End bp525922 
Gene Length2067 bp 
Protein Length688 aa 
Translation table11 
GC content68% 
IMG OID641593325 
Productglycine--tRNA ligase 
Protein accessionYP_001716663 
Protein GI169830681 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0751] Glycyl-tRNA synthetase, beta subunit 
TIGRFAM ID[TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCTG ACCTTGTGCT GGAAATCGGG ACCGAGGAGA TCCCGGCCCG TTTCCTGCCC 
CCGGCGCTTG CGGAACTGGC CGAAAAGGGC CGCGCCCTGC TGGCGGAATA CCGCCTGGCC
TATGCGGACC TGGCGGCGTA CGGTACGCCG CGGCGCCTGA CCCTCTACGT CCGGGACCTG
GCCGGCGACC AGGCCCCCCT GGTTCAGGAA ATAAAGGGAC CGCCCAAGAA AGCGGCGTTT
GACATTGACG GGGTGCCCAC CAAGGCGGCG CTCGGTTTCG CCCGGAGCCA GGGTGTGGCC
GTGGAAGACC TGGTGACGCG GGCGGTGGGC CCCGTGGAAT ACGTCTACGC GGTGCGGCAG
GAGACCGGAC GGCCGGCCGC GGAGATCCTA GCCGAGCTCG GCCCCCGGCT GATCGGGGCG
CTTGTTTTCC CCAGGCCGAT GCGCTGGGGC GACCAGGATT TCCGGTTCGT GCGCCCGATC
CGGTGGATTC TCTGTGTCCA CGGCGACCGG GTAATCGAGT TCACGGTCGC CGGAGTCCGG
TCTGGACCTC ACACCTGGGG GCACCGCTTC CTGAGCGCCG GGCGCCTGCT GGTCACGACT
GCCGGCGACT ATTTCACCCT CCTGGAAGAA AACTTCGTGA TTGTAGACCC GGCGCGCCGC
CGGGAAATGG TGTGGGAACA GGTCCGGGCA GCCGCGGCGG CGGAGAGCGG CACGGTTGCG
GACGACCCCG AGCTTTTGGC CGAGGTGGCC GATCTCCTGG AGTATCCCTC CGCTTTTTGC
GGGTGCTTCC CGGAGAGCTA CCTTGAACTC CCCGAGCCCG TGCTGGTCAC CCCTATGCGC
GAGCACCAGC GGTACTTCCC GGTGCGAGAC GGCACCGGGC GGCTGATGCC GTTCTTCGTC
GGGGTGCACA ACGGGACGGC CGAGCACCTG AACCTGATCC GGTCCGGGAA CGAGAAGGTG
TTGCGGGCGC GGTTGGCCGA TGCCGCCTTC TTCTTCCGCG AGGACCTGGA GGTGCCTCTG
CCCGACCGGG GACCGGAACT GAAAAAAGTG GTGTTCCAGG AGAGCCTGGG CACCATGCAC
GAGAAAGTGG AACGCCTGAC GGCCTTGGCC GGGTATTTGT CGTCCGCCCT TGGGCTGGAC
GAAACCGAGC GCGCCCAGGC GCACCGGGCG GCAGTCCTTT CCAAGAACGA CCTCTTGACC
AGCATGGTGT ACGAGTTTCC GGAGTTGCAG GGCATTATGG GCCGGGAGTA CGCCCTGCGC
GCCGGGGAGG CGCCGGCGGT GGCCGAGGCG ATCCGTGAGC AGTACCTGCC CGCCCCGGGC
GGGGAAGAGC TGCCCGCGAC CCGCGCCGGT CTGGTGCTGG CCCTGGCCGA CCGGGCGGAC
AACCTGGTGG GGGCCTTCGG GATGGGCGTC CAGCCCACCG GGTCCCAGGA TCCGTACGCC
TTAAGGCGCC AGGCCCTCGG CATCTGCCAC CTCCTGCTGG ACACGCCGGC CTACCTTGAC
CTGGACGACT TTTTCCGGGA GGCGTATGCC GCCTACGGCG GGCGGCTGAC TGTGGAGGCC
GGGGAGGTGG CGGCGCAGTT GGCGGATTTC TTCGGGCAGC GCCTGCGGGT CCTGTTCCAG
GACCGGGGCC TTTCTTACGG GGTGGTGGAA GCGGCCCTGG CGGCCGGCCA CGCCGACGTC
CGGGACGCTT GGGAGCGGGC CACGGCGGTG GCGACCTTCC AGTCGCACCC GGCTTTCGCG
GACATCTCCA CCGCCTTCAC CCGGGCGAAC AACCTGGCCA AGAACGCCGC CGGCACCCGG
GTCGAGCCGG CACTTTTCAA AGACCCGGTG GAACACACCC TGTACCAGGC CTTTCTTCAG
GTGCGGGAGC AGGTCGAAGC CCAGATCGCC CGACGCCGGT ACGGTGCGGC CCTGGCCGCG
CTGGCGGAAC TGCGCGAGCC GGTGGACCGC TTCTTTGACG GAGTCATGGT GATGGTCGAG
GAAGCGGCCG TGCGGGAAAA CCGCCTGGCT CTTTTACGCT TGGTGGCCGA TCTGTTCAAG
GGCATCGCGG ACCTGTCAAA GTTCTAA
 
Protein sequence
MAADLVLEIG TEEIPARFLP PALAELAEKG RALLAEYRLA YADLAAYGTP RRLTLYVRDL 
AGDQAPLVQE IKGPPKKAAF DIDGVPTKAA LGFARSQGVA VEDLVTRAVG PVEYVYAVRQ
ETGRPAAEIL AELGPRLIGA LVFPRPMRWG DQDFRFVRPI RWILCVHGDR VIEFTVAGVR
SGPHTWGHRF LSAGRLLVTT AGDYFTLLEE NFVIVDPARR REMVWEQVRA AAAAESGTVA
DDPELLAEVA DLLEYPSAFC GCFPESYLEL PEPVLVTPMR EHQRYFPVRD GTGRLMPFFV
GVHNGTAEHL NLIRSGNEKV LRARLADAAF FFREDLEVPL PDRGPELKKV VFQESLGTMH
EKVERLTALA GYLSSALGLD ETERAQAHRA AVLSKNDLLT SMVYEFPELQ GIMGREYALR
AGEAPAVAEA IREQYLPAPG GEELPATRAG LVLALADRAD NLVGAFGMGV QPTGSQDPYA
LRRQALGICH LLLDTPAYLD LDDFFREAYA AYGGRLTVEA GEVAAQLADF FGQRLRVLFQ
DRGLSYGVVE AALAAGHADV RDAWERATAV ATFQSHPAFA DISTAFTRAN NLAKNAAGTR
VEPALFKDPV EHTLYQAFLQ VREQVEAQIA RRRYGAALAA LAELREPVDR FFDGVMVMVE
EAAVRENRLA LLRLVADLFK GIADLSKF