| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0480 |
|---|
| Symbol | |
|---|
| ID | 6026888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 518736 |
|---|
| End bp | 519593 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641593320 |
|---|
| Product | NLP/P60 protein |
|---|
| Protein accession | YP_001716658 |
|---|
| Protein GI | 169830676 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0218691 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACTGGTC TGCCCTTCGC CGGGGTGGAA ACTGTGGCCC CGGCCGCCGC CACCCAGCCC
CAGACTCATT ACATAGTAAA AAGCGGCGAC TCGCTGTGGA CCATCGCCCG CCGGCTGGGC
ACCTCGGTTG CCGCCCTCAA GCGGGCCAAT AATCTGCGAA GCGACTTGAT TTTCCCCAAC
CAGGTTCTGG TGATTCCGGT AACGGCCGTT TCGGCGCCGG CAGCGCCGGC GGCGGCTGCG
TCCCCGGCTG AAGCCCAAAA CGACGCAGCC GAGAAAATAC CCCCGATCAA CGAGTACACG
GTGCAGGCGG GGGATACCCT GTGGTCGATC GCGCAAAAGC TCGGTGTCGA TCCGGGGGCT
CTGAAGCGCG CTAACAACGT GCAGAATGAC TTTCTGGAAA TCGGTCAAGC ATTGATCATT
CCCGAGCCGG GGGCCGGCAC GCCGGCCTCG CACAGGGTGC CCAACCCGAT GCCCAGCCGT
TCCGGCGACC GCATGCAAAT CATCCTGGAT TACGCCCGCA CCCTGGAGGG GCACCCCTAC
CGCTGGGGGG GTAACAGCCC GGGCGGGTTT GACTGTTCCG GTTTTGTTTA CCACGTGTTT
GAACACCACG GGATCTCTCT TCCCCGGACC TCCTACGCCA TGTTTGGGGT CGGCACCCCG
GTGAGCCGGT CGGAACTCTG TCCTGGCGAC CTGGTCTTCT TCACCACCTA CCGCGCCGGC
GCTTCCCACG TCGGGATTTT CTACGGCAAC GAGATGTTCC TGCACGGCAG CTCTGCCGGG
GGCGCGGTGA TCTGGACCAG CCTTGACACC CCTTACTACA GCGCCCGTTT TCTCGGCGGC
CGGCGGGTTT TGCCCTAG
|
|---|
| Protein sequence | MTGLPFAGVE TVAPAAATQP QTHYIVKSGD SLWTIARRLG TSVAALKRAN NLRSDLIFPN
QVLVIPVTAV SAPAAPAAAA SPAEAQNDAA EKIPPINEYT VQAGDTLWSI AQKLGVDPGA
LKRANNVQND FLEIGQALII PEPGAGTPAS HRVPNPMPSR SGDRMQIILD YARTLEGHPY
RWGGNSPGGF DCSGFVYHVF EHHGISLPRT SYAMFGVGTP VSRSELCPGD LVFFTTYRAG
ASHVGIFYGN EMFLHGSSAG GAVIWTSLDT PYYSARFLGG RRVLP
|
|---|
| |