Gene Daud_0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0415 
Symbol 
ID6026120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp456442 
End bp456867 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content57% 
IMG OID641593257 
ProductPilT domain-containing protein 
Protein accessionYP_001716595 
Protein GI169830613 
COG category[R] General function prediction only 
COG ID[COG2402] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00369357 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGTCT ACCTCGACAC GTCCGCGATC CTGGCCGTCC TCGATGCCGA TGACCAGTAC 
CATAACGTCG CCAAAACCCA ATGGAAATCG CTGTTGCACA GTGACACAAT CCTGGTCTGC
AGCAATTACA TACTTGTGGA GACCTATGCC CTGGTGCAGC GTCGCTTGGG AATGGGAGCG
GTGAGGTTGC TTTCCACGGA CATCGAGCCG ATCGTCCGGG TGATCTGGGT GGATGAACAA
ACTCACCGGC GGGGGGAAGC AGCGGTGATT GCAGCTCAGC GCAAGGAGCT GAGCCTGGTG
GACTGTGTGA GTTTCGTAGT CATGCGTCAA GCCGGGATTC GAGAGGCATT TACCTTCGAC
CGGCACTTTG CGGAACAGGG TTTCACCTGT CTTCCGGGTG GGTTGCCGAG CACCCAACAA
GAATAG
 
Protein sequence
MMVYLDTSAI LAVLDADDQY HNVAKTQWKS LLHSDTILVC SNYILVETYA LVQRRLGMGA 
VRLLSTDIEP IVRVIWVDEQ THRRGEAAVI AAQRKELSLV DCVSFVVMRQ AGIREAFTFD
RHFAEQGFTC LPGGLPSTQQ E