Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0415 |
Symbol | |
ID | 6026120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 456442 |
End bp | 456867 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641593257 |
Product | PilT domain-containing protein |
Protein accession | YP_001716595 |
Protein GI | 169830613 |
COG category | [R] General function prediction only |
COG ID | [COG2402] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00369357 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGGTCT ACCTCGACAC GTCCGCGATC CTGGCCGTCC TCGATGCCGA TGACCAGTAC CATAACGTCG CCAAAACCCA ATGGAAATCG CTGTTGCACA GTGACACAAT CCTGGTCTGC AGCAATTACA TACTTGTGGA GACCTATGCC CTGGTGCAGC GTCGCTTGGG AATGGGAGCG GTGAGGTTGC TTTCCACGGA CATCGAGCCG ATCGTCCGGG TGATCTGGGT GGATGAACAA ACTCACCGGC GGGGGGAAGC AGCGGTGATT GCAGCTCAGC GCAAGGAGCT GAGCCTGGTG GACTGTGTGA GTTTCGTAGT CATGCGTCAA GCCGGGATTC GAGAGGCATT TACCTTCGAC CGGCACTTTG CGGAACAGGG TTTCACCTGT CTTCCGGGTG GGTTGCCGAG CACCCAACAA GAATAG
|
Protein sequence | MMVYLDTSAI LAVLDADDQY HNVAKTQWKS LLHSDTILVC SNYILVETYA LVQRRLGMGA VRLLSTDIEP IVRVIWVDEQ THRRGEAAVI AAQRKELSLV DCVSFVVMRQ AGIREAFTFD RHFAEQGFTC LPGGLPSTQQ E
|
| |