Gene Daud_0387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0387 
Symbol 
ID6025672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand+ 
Start bp418303 
End bp419232 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content66% 
IMG OID641593235 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001716573 
Protein GI169830591 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID[TIGR02790] nickel ABC transporter, permease subunit NikC 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCATCT CGAAAAACTT CGGCGCTGGG GTTGCCGGTT ACTCTGCCGC CGGGAAACCG 
GCGGGCCGGG CAAGGGCCGG ACCGCGCGGG CTGCCGGGTG AGGCGCTGGC AAGACTCTGG 
CAGGATAAAC TGGCTCTTTT GGGGCTGGTG ATCATCCTGG CCGTGGTGGC CGTGGCGGTC 
TTTGCGCCCT ATATTGCGCC CAACGACCCC GTAAAGGTGG ATCTGGCGCA GCGTCTTGCA 
CCGCCCGGCG CGCAGTACCC CCTGGGCACC GACCACCTGG GGCGCTGCCT TTTGTCGCGG 
TTGATCTATG GCACGAGGGT GTCCCTGGCC ACGGCGGCTT TGGCCCTGAC GGCAATCATG 
CTCATCAGCA TTCCCCTGGG CACCCTGGCG GGCTACTGCG GGGGGCGGGT GGACAACGCC 
GTCATGCGGG TAGTTGACGT GTTGCTGGCC TTCCCGGGCC TGGTGCTGGC TCTGGTCATT 
GCCGGGATGC TGGGGCCGGG GCTTTTAAAC GTGATGCTGG CCCTGGCCGC CGTCTGGTGG 
GTGGGGTACG CCCGGGTCAT CCGGGGGATG GTTCTTTCGG TGAAAGAGAA GGAATTCGTC 
TTGGCGGCCC GGGCCTGCGG CACTCGTGAG TTGGGCATCA TCACCCGGCA CATCCTGCCC 
AACGTACTCT CCCCGGTGAT CGTCCTGGCC ACGCTGGATA TGGGCAAGCT GATCCTGGCC 
ATCTCCGGGC TTTCCTTCCT GGGCCTCGGC GCCCAGCCGC CCACGCCGGA GTGGGGGGCC 
ATGCTGAACG ACGGCCGCCC TTACATGCAG GTGGCGCCGC AGCTCATGGT CTACCCGGGT 
CTTTGCATCA TGACGGTGGT GCTGGCCTTC AACCTGCTGG GCGACGGCTT AAGGGACGCC 
CTGGACCCGC GGGGGATTAC CAGGTTTTAA
 
Protein sequence
MSISKNFGAG VAGYSAAGKP AGRARAGPRG LPGEALARLW QDKLALLGLV IILAVVAVAV 
FAPYIAPNDP VKVDLAQRLA PPGAQYPLGT DHLGRCLLSR LIYGTRVSLA TAALALTAIM 
LISIPLGTLA GYCGGRVDNA VMRVVDVLLA FPGLVLALVI AGMLGPGLLN VMLALAAVWW 
VGYARVIRGM VLSVKEKEFV LAARACGTRE LGIITRHILP NVLSPVIVLA TLDMGKLILA 
ISGLSFLGLG AQPPTPEWGA MLNDGRPYMQ VAPQLMVYPG LCIMTVVLAF NLLGDGLRDA 
LDPRGITRF