| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0358 |
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| Symbol | |
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| ID | 6026656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 384755 |
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| End bp | 386347 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641593210 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_001716548 |
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| Protein GI | 169830566 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGCAA TCCAGATCTA CGATACCACC CTCCGCGACG GCACCCAGGG CGAGGGCGTC
GCCTTCTCGG TGGAAGACAA GATCAAAATC ACCCGCCGGC TGGACCGGAT GGGCTTTCAC
TACGTGGAAG GGGGCTGGCC GGGCTCGAAC CCCAAGGACC TGGAGTTCTT CCGGCAGATT
AGAAACGAGC GTTTCCGCCA GGCCAAGGTC GCGGCCTTCG GCAGCACCCG CAAGGCGGGC
CGCCCGGCCG ACCAGGACGC CAACCTCCTG GCTATCCTGG AGTCCGGCGT CTGCACGGCA
ACCATTTTCG GCAAGAGCTG GGACTTTCAC GTCTACCGGG CGCTCGGCAC CACCCTGGAG
GAGAATCTGG CCATGGTCGC CGACTCGGTG GCTTTCCTGA AGAGCCGCGG GCTGGAGGTG
CTCTTCGACG CGGAGCACTT CTTCGACGGC TACCGGGCGA ACCCCCAGTA CGCCATGGCC
GTGCTGCGCG CCGCCCAGGA CGCCGGGGCC GACATGGTGG TGCTCTGCGA CACCAACGGG
GGCACTCTGC CCACCGAACT CAAGGAAATC GTCACCTACG TCCGGGAGGC CCTGGAAGTG
CCGCTCGGCA TCCACGCCCA CAACGACGGC GGCCTGGCGG CGGCCAACTC CATCCTGGCC
GTGGAGGCGG GCTGCATCCA GGTGCAGGGG ACCATCAACG GCTACGGCGA GCGTTGCGGC
AACGTCGACC TCTGTACCGT GATCCCGAAC CTGGTCTTCA AAAAGCGGCT CGCCTGTATC
CCCGAGGAGA ACCTCGTCTA CCTAACCGAC CTCTCCCGGT ACGTGTCGGA GCTGGCCAAC
AAGAGCCCGG AGTCCCGCCA GCCCTTCGTG GGCACCAGCG CCTTCGCGCA CAAGGGCGGG
ATCCACGTGA ACGCCCTTCT GAAGGACCGC CAGACCTACG AGCACATCCC GCCCGAGAGC
GTGGGCAACA AGCGGCGGGT CCTGGTTTCC GAGCTGTCCG GCCTGTCCAA CCTGGTGTAC
AAGTATCGCG AGCTAAACCT GGGCCCGGAG CGGGACAGCG CCGAGTACCG CCGCATCCTG
AACGAATTGA AAGACCTGGA GCACCAGGGG TTCCAGTTCG AGGGCGCCGA AGGTTCCTTC
GAACTCCTCA TGCGCAAGGC CTACAACGGC TACCAAAAGC CCTTCCGGCT GGAGACCATG
CGCATCCTGA CCGAACTCCG GGACGAAGGG CACGTGTACA GCGAGGCGAT CATCAAGCTC
CGCGTCAACG ACGAGATCGT GCACACCGCC GCCGAGGGGA ACGGCCCGGT GAACGCCCTC
GACGCCGCCC TGCGCAAGGC TCTGGAGGAA TTCTACCCGG TTATCAGGAA CATGCGGCTC
CACGACTACA AGGTGCGCGT CCTGAACGAG AAAGAAGGCA CCGGCGCGGT GGTCCGGGTG
CTGATCGAAA CCGGCGACGG CCGGAAATCC TGGGGCACAG TGGGAGTTTC TTCCAACATC
ATCGAGGCCA GTTGGCAGGC CCTGGCAGAC AGCTTCGCCT ACGGGATCCT GAAGCTCAAA
GAGAACGGTG CACCCGACGC CCAGGCGCCG TGA
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| Protein sequence | MSAIQIYDTT LRDGTQGEGV AFSVEDKIKI TRRLDRMGFH YVEGGWPGSN PKDLEFFRQI
RNERFRQAKV AAFGSTRKAG RPADQDANLL AILESGVCTA TIFGKSWDFH VYRALGTTLE
ENLAMVADSV AFLKSRGLEV LFDAEHFFDG YRANPQYAMA VLRAAQDAGA DMVVLCDTNG
GTLPTELKEI VTYVREALEV PLGIHAHNDG GLAAANSILA VEAGCIQVQG TINGYGERCG
NVDLCTVIPN LVFKKRLACI PEENLVYLTD LSRYVSELAN KSPESRQPFV GTSAFAHKGG
IHVNALLKDR QTYEHIPPES VGNKRRVLVS ELSGLSNLVY KYRELNLGPE RDSAEYRRIL
NELKDLEHQG FQFEGAEGSF ELLMRKAYNG YQKPFRLETM RILTELRDEG HVYSEAIIKL
RVNDEIVHTA AEGNGPVNAL DAALRKALEE FYPVIRNMRL HDYKVRVLNE KEGTGAVVRV
LIETGDGRKS WGTVGVSSNI IEASWQALAD SFAYGILKLK ENGAPDAQAP
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