Gene Daud_0357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0357 
Symbol 
ID6026828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand+ 
Start bp384226 
End bp384720 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content67% 
IMG OID641593209 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_001716547 
Protein GI169830565 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR02084] 3-isopropylmalate dehydratase, small subunit
[TIGR02087] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.427238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCTGG AGGGCAGCGC CTGGAAATTC GGCGACAACA TCGACACCGA CGTCATCATC 
CCGGCCCGCT ACCTGAACAC CTCCGACCCG GCCGAGCTGG CCAAGCACTG CATGGAGGGC 
GCCGACCCGG CGTTTGCCGG CAAGGTGCAG CCCGGCGACA TCATCATCGG CGGCAACAAC 
TTCGGCTGCG GCAGCTCGCG CGAGCACGCG CCGCTGGCTA TCAAGGGGGC CGGGGTGTCC 
TGCGTGATCG CCCGGACCTT CGCCCGCATT TTCTACCGGA ACGCCTTCAA CATCGGCCTG 
CCGATCCTGG AGTGCCCGGC GGCCGTCGAG GGCATCCGGA CCGGCGACCG GGTGGCGGTG 
GACGCCGCCG CCGGCAAGAT CAAAAACCTG TCCACCGGCG CCGAGTTCGA AGCCAAGCCG 
ATCCCCCCGT TCATGCGAGA AATTATCGCC GCCGGGGGAC TGATCGAGCA CGTGAAGCGG 
AAAGTCGCCA AGTAG
 
Protein sequence
MHLEGSAWKF GDNIDTDVII PARYLNTSDP AELAKHCMEG ADPAFAGKVQ PGDIIIGGNN 
FGCGSSREHA PLAIKGAGVS CVIARTFARI FYRNAFNIGL PILECPAAVE GIRTGDRVAV 
DAAAGKIKNL STGAEFEAKP IPPFMREIIA AGGLIEHVKR KVAK