Gene Daud_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0348 
Symbol 
ID6025463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp373245 
End bp374891 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content64% 
IMG OID641593200 
Productputative manganese-dependent inorganic pyrophosphatase 
Protein accessionYP_001716538 
Protein GI169830556 
COG category[C] Energy production and conversion 
COG ID[COG1227] Inorganic pyrophosphatase/exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACGCA AGCGGGTCTT AGTCGTCGGC CACCGCTCAC CGGACAGCGA CAGCGTCTGC 
GCGGCGATCG GTTACGCCTA TTTCAAGAAC ATCCTGGACG ACACTCAGGT TTACGTGCCC
TGCGCGGCCG GGTCGTTGAA CCCGGAGACG GAATACATTC TGGAGCGTTT CGGCCTGGAA
CCGCCGGTGC AGGTCGCAAG CGTCGCGGCC ACAGTCGCCG ACATGGACCT GAACCGGCCG
ATCTCCATCT CGCCCCGGGA CTCCATCCTC GACGCCGCCA ACCTCATCAA GGAGAAGCGC
ATCCGGAGCC TGCCGGTGGT GGACGAGGAC GGCCGGTTGC TGGGGATCGT GGACACGCTG
CACCTGGCGG TGTTCTTCGC GGAGCGGCTC GACATCGAGG GGCTTTCGGT CAGTCCGGTG
CAACTGCACC TCCTGATTTC CGCCCTGCAG GGGAAGGTGC TGGCGAATAC CGGCCGCGTG
ACCACGCTCG GGGGGGACGT GTTCGTGGCC GCCTCCCAGA AGGTCAGCAC GCTGAACCGG
ATGAAGAAGG GTGACATCGC CATCCTGGGG GACCGGACGG ACATCCAGAA GGACCTCATC
AAGGGCGGGT GCGCCGCCCT GATCGTCACC GGGGACCATG CCGTGAGCGA GGAGGTCCTC
GAGTTGGCCC GGCGCCACCA GGTGCTGGTG ATCAGCTCCC CCTACCGCAC CTTCGCCACG
GCCCAGTTGG TGAACCTCTG CCGGCCGGTG TCTTACATCA TGTCGTCCAA CGTGCCGGTG
GCCGGGTTAC ACACCACCAT CAGCGAGGTC AAGCGGCAGA TCGTGGAGTC GGACTGCCGC
TGCGCCATGG TGGTGGACGA GGACGACCGG CTGATCGGGA TCATCACCCG GAGCGACCTT
TTAGACCCCG TTCAGAAGCA GGTGATCCTG GTGGACCACA ACGAGATCTC CCAGGCCGTG
GCCGACATCG AGCAGGCCGA CATTCTGGAG ATCATCGATC ACCACCGCCT GGGGGACATC
TCGACCATCA AGCCGATCAC CGTCTACAAC GAGCCGGTCG GGAGCACCTG CACCATCGTG
GCCATGCAGC TTTGCCTGCA CCAGGTGGAG GTCCCCCCCG AGATCGCGGG CGCGCTCCTC
TCGGGCATCC TGTCGGACAC CCTGCTCCTG ACCCTTTCCA CCACCACCGA CAAGGACCAC
GTGATGGCGC ACCGTCTAAG CGAGATGGCC GGGCTGAACC TGGCGGACTA CGGCAAGGAA
CTCCTGGCGG TCAGCGTCAC CGCCGAGGGC ATCCCGGCCC AGGAAATCGT CACGCTGGAC
TTTAAGGAAT ACCACCTGGC GGGGAAGAAA ATCGGGGTGA ACCAGATTAT GGTCCTGGAC
GACTCCGAGA TCAAGTCCCG GGAGGCAGAG ATCAAGGGCG AGATGGAGAA GCTCTGCCTG
GCGGGGGGCT ATGACCTCCT GGCGCTCCTG ATCACCAACC CGCTTTCGGG CAAAGGCGAG
GAGATCTGGG TCGAGGGCGC CGAGCAGGAA ATTGTCGGCC GGGCCTTCGG GGTTAAGGTC
GAAGACGGCA AATGCTTTGT GCCCCGGGTA CTCTCCCGGA AGAAGGACTT CATCCCCCGG
ATCGCGACGG CCCTGCGGGA ACGGTAG
 
Protein sequence
MKRKRVLVVG HRSPDSDSVC AAIGYAYFKN ILDDTQVYVP CAAGSLNPET EYILERFGLE 
PPVQVASVAA TVADMDLNRP ISISPRDSIL DAANLIKEKR IRSLPVVDED GRLLGIVDTL
HLAVFFAERL DIEGLSVSPV QLHLLISALQ GKVLANTGRV TTLGGDVFVA ASQKVSTLNR
MKKGDIAILG DRTDIQKDLI KGGCAALIVT GDHAVSEEVL ELARRHQVLV ISSPYRTFAT
AQLVNLCRPV SYIMSSNVPV AGLHTTISEV KRQIVESDCR CAMVVDEDDR LIGIITRSDL
LDPVQKQVIL VDHNEISQAV ADIEQADILE IIDHHRLGDI STIKPITVYN EPVGSTCTIV
AMQLCLHQVE VPPEIAGALL SGILSDTLLL TLSTTTDKDH VMAHRLSEMA GLNLADYGKE
LLAVSVTAEG IPAQEIVTLD FKEYHLAGKK IGVNQIMVLD DSEIKSREAE IKGEMEKLCL
AGGYDLLALL ITNPLSGKGE EIWVEGAEQE IVGRAFGVKV EDGKCFVPRV LSRKKDFIPR
IATALRER