Gene Daud_0346 details

Gene Information

• Locus tag: Daud_0346
• ID: 6027174
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: +
• Start bp: 370471
• End bp: 371016
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 641593198
• Product: ECF subfamily RNA polymerase sigma-24 factor
• Protein accession: YP_001716536
• Protein GI: 169830554
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGAGA CGGTGGTGGC TCCGGATGAG GCCGGTCTGG TGGAGCGAGC CGGGCACGAT 
CCGGAGGCGT TCCTGGAACT CTACAACCGG CACGTAAACG GGCTGTACCG GTTTGCGTTT 
TACCGGCTTG GAAACCGGGA GGAGGCTGAG GACGCGGTGT CCCAAACCTT TCTGCAGGCG 
ATGCGCTACC TGGACCGGTA CGAACAGCGG GGCATCCCGT TCCGCCACTG GTTGTACCGT 
ATCGCGGCCG GCGTCATTTC TCGCGCCGCC GACTACCGGC GACGGGAGAT ACCGCTGACG 
GCGGGGCGTT TTGATACCGG CACCGGCGAC CCGGAGGCGC TTCCGGAACG GCTGGATCTG 
GCGGCGCTGC TTCGCACACT GCCCGCGACG CAGCAGGAGG TGCTGGTGCT GCGTTACGTC 
CAGGATCTCA GCCTGCGGGA GGTGGCCCAG ATCACGGGCC GGTCCGAGGG CGCCGTGAAG 
CAGTTGGCCT GGCGCGGCTT GCGTACTCTG CGGGAGAGGA TGGGGATCGG TGGGCCACAG 
GGATAA 

 

Protein sequence

MAETVVAPDE AGLVERAGHD PEAFLELYNR HVNGLYRFAF YRLGNREEAE DAVSQTFLQA 
MRYLDRYEQR GIPFRHWLYR IAAGVISRAA DYRRREIPLT AGRFDTGTGD PEALPERLDL 
AALLRTLPAT QQEVLVLRYV QDLSLREVAQ ITGRSEGAVK QLAWRGLRTL RERMGIGGPQ 
G