| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0330 |
|---|
| Symbol | |
|---|
| ID | 6027670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 354892 |
|---|
| End bp | 355329 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641593182 |
|---|
| Product | ribosomal protein L13 |
|---|
| Protein accession | YP_001716520 |
|---|
| Protein GI | 169830538 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0102] Ribosomal protein L13 |
|---|
| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000116087 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACACGA CTTCGACTTA CATGATGCGG GCTCAGGATG TGGAGCGGAA GTGGTACATC
CTGGACGCCA CCGGAAGACC GCTCGGCCGG GTTGCGGCTG AAGCGGCACG CATCTTGAGG
GGCAAACACA AGCCCGGTTT CACCCCCCAC GTCGACTGCG GGGACCACGT AATCATCGTC
AACGCGGCCC AGGCGGTACT GACCGGCAAC AAGCTTAACA ACAAGTTCTA TTACCGGCAC
ACCGGTTACC CGGGCGGTCT CAAGGCGGTG GACTACCGAA CCTTTATGGC CAAGAGGCCG
GAGGAGGCGG TGCGTAAGGC TGTGGTCGGC ATGCTTCCGC ACACCCGCCT CGGGGCGCAG
ATGGCCAAGA AACTCAAGGT ATACGCCGGA CCCGAACACC CGCACCAGGC CCAGGGGCCG
GAAGTCTGGC AGGGGTAA
|
|---|
| Protein sequence | MNTTSTYMMR AQDVERKWYI LDATGRPLGR VAAEAARILR GKHKPGFTPH VDCGDHVIIV
NAAQAVLTGN KLNNKFYYRH TGYPGGLKAV DYRTFMAKRP EEAVRKAVVG MLPHTRLGAQ
MAKKLKVYAG PEHPHQAQGP EVWQG
|
|---|
| |