Gene Daud_0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0304 
Symbol 
ID6026902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp331224 
End bp331997 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content68% 
IMG OID641593158 
ProductTriose-phosphate isomerase 
Protein accessionYP_001716497 
Protein GI169830515 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0149] Triosephosphate isomerase 
TIGRFAM ID[TIGR00419] triosephosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTGCGCC AGCCGATTAT CGCCGGCAAC TGGAAGATGT ACAAGACGCC TTCCGAAGCC 
GTGGAATTCG TGAGGCGGCT CCAGGAGGCG AGTGCCGGCG TTGATAACGT GGAAATCGTG
GTTGCACCGC CGTTTCCGGC TTTGGTACCG GTGGCCGGGG TGTTGGCCGG GTCGTTCATC
GGCCTGGCCG CCCAGAACAT GTTCTGGGAA GCCGAAGGGG CTTTCACCGG CGAGGTTTCG
CCGGTGATGC TGGCGGAGAT CGGCTGCCGG TACGTGATCC TCGGCCACTC CGAACGGCGG
CAGTACTTCG GGGAAACCGA CGCGAACGTG AACCGCAAGG CTTGGGCCGC GCTGGACCGG
GGGCTGGTCC CGATCGTCTG CGTGGGGGAG TCCCTGGACG AGCGCGAGGC GGGCCGGACC
GAGAAGGTGG TCACCGCCCA GATCCAGGGG TGCCTGGCCG GATTGCCGGC GGACGCGGTG
GCCGGGCTGG TCATCGCCTA CGAACCGGTT TGGGCGATCG GGACGGGCCG GACCGCTAGT
CCCGCGGACG CCCAGGAGGT AAGCGCCCGG ATCCGCGCCC TGGTGGCCGA ACTCTTCGGC
CGGGAGGCGG CGGACCGGGT CCGGATCCAG TACGGGGGCA GCGTTAAACC GGAGAACACC
CGTGCGCTGA TATCCCAGCC GGACATCGAC GGGGCCCTGG TGGGAGGGGC GAGCCTGAAG
GTCGAGAGTT TCGCCGGCAT CATCCGGGAG ACCGGGGGGG CGGTGGGGCG TTGA
 
Protein sequence
MVRQPIIAGN WKMYKTPSEA VEFVRRLQEA SAGVDNVEIV VAPPFPALVP VAGVLAGSFI 
GLAAQNMFWE AEGAFTGEVS PVMLAEIGCR YVILGHSERR QYFGETDANV NRKAWAALDR
GLVPIVCVGE SLDEREAGRT EKVVTAQIQG CLAGLPADAV AGLVIAYEPV WAIGTGRTAS
PADAQEVSAR IRALVAELFG REAADRVRIQ YGGSVKPENT RALISQPDID GALVGGASLK
VESFAGIIRE TGGAVGR