| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0301 |
|---|
| Symbol | |
|---|
| ID | 6026991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 327899 |
|---|
| End bp | 328846 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641593155 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001716494 |
|---|
| Protein GI | 169830512 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1481] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00647] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCCGTGT CGTTTTCTGC CCATACCAAG GACGAACTGG CCCGGATCGA GGGGTTGCCG
TCTTGCTGCC GGTTGGCGGA ACTGGCGGCT CTGGCCAAGC TGAACGGCCG CCTTGTACAC
GGACCGGCGG AACTGCTGAT CGTGACGGAA AACGCGGCGA TTGCCCGCAA GGTTTTCAAG
GCGTTGAAGA TGCAATTCAG GCTCGCCGCC CGGGTGGAAA TCCGTCGCAA GCCGCGGCTG
AAGAAAAACA ACGAGTATCT GGTCCGGATC GGCAACCAGG ACGGCTTGGG CCCCGCCCTG
GAGGAAATGG GCCTGTGCAC TGTTTCCCTG CGGGTCAGAC CCGGTTTGAA ACGGGATCTG
GTGCGCCGGG AATGCTGCCG GCGGTCTTAC CTCCGGGGGG CGTTCCTGGC CCGCGGTTCG
GTTTCCAGCC CCCGGGGATC CTACCACCTG GAAATCACCG TCGGGGACCA GCGCATGGCG
GCGGACTTAT CGGGCTTGAT GCGCAAGGTC GGCCTGGAGG GGCGCCTCTC CCCGCGTAAA
CGGGGTTGGA TAGTGTACCT CAAGGACGGC GAGCAGGTGG CCGACGCGCT TAAGCTCATG
GGAGCGCACG CGGCCCTGCT CGATTTTGAA AACGCCCGCG TCTACAAGGA TATGCGCAAC
CGGGTGAACC GGCTGGTGAA CTGTGACACG GCCAACCTGG GGAAAACAGT GTCGGCCGGG
GTGCGCCAGG AGGAACACAT CCGGCTGGTG GTGCAGCGGT TCGGCCTGGA GACGCTTTCC
CCGCCGCTCC GCCAGGTGGC CCGGCTGCGC CTGCAGTATC CTGAAGTCAG CCTGCGTGAA
CTGGGTGAGT TGGCCCAGCC TCCCTTGAGC AAGTCTTGCG TTAACCATCG CCTGCGGAAG
CTTGAACAGA TCGCCGAGCA TATTTTGGCT TCCAGAACCC GGAATTGA
|
|---|
| Protein sequence | MPVSFSAHTK DELARIEGLP SCCRLAELAA LAKLNGRLVH GPAELLIVTE NAAIARKVFK
ALKMQFRLAA RVEIRRKPRL KKNNEYLVRI GNQDGLGPAL EEMGLCTVSL RVRPGLKRDL
VRRECCRRSY LRGAFLARGS VSSPRGSYHL EITVGDQRMA ADLSGLMRKV GLEGRLSPRK
RGWIVYLKDG EQVADALKLM GAHAALLDFE NARVYKDMRN RVNRLVNCDT ANLGKTVSAG
VRQEEHIRLV VQRFGLETLS PPLRQVARLR LQYPEVSLRE LGELAQPPLS KSCVNHRLRK
LEQIAEHILA SRTRN
|
|---|
| |