Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0296 |
Symbol | |
ID | 6025506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 321583 |
End bp | 322392 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641593150 |
Product | Cof-like hydrolase |
Protein accession | YP_001716489 |
Protein GI | 169830507 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCGGACT ACAGGTTGGT GGCCGTCGAC CTGGACGACA CCCTGCTCAC GAGCGGGCTG GAGGTTTCGC CGCGCGCGGG GCGGGCGATC AGCCGCGCCC AGGCGCTGGG TGTGGTGGTC ACCCTGGCGA CCGGGCGGAT GTATCTTTCT GCGGTGCCGT TCGCGCGCCG CCTGGGCATT GACGCTCCGA TCATCACTTA CCAGGGCGCG CTGGTAAAGC ACCCGGTGAC CGGCGCTGAG CTTCTGCACC GGGCGCTGGC GAACGACACC GCTCGGGCCG TGATCGAACG CCTGCGAGCC TATGGCTACC ATCTCAATGT GTACCTGGAC GACCAGCTCT ACATGGAAGT CCTGACCGAA CTCGGCAAAA GGTACGCCGA CCTCTCCCGG GTTGAAGCCC ACCCGGTGGG CGATCTCCTG GTCTACCTCG GCGACCGCAA CCCGACCAAG GTGCTGGCCA TCGGCGGCGA GGACGAAATC GAGCGCCTGG AGCAGGAGAT GATCGCCCTT TTCCCGGCGG AGCGGGTGCA CATCACCCGT TCGAAGCCCA AGTTCCTGGA GTTTTCCCAC CCCCTGGCCA CCAAGGGCCG GGCGCTGCAG TACCTGGCGG CGTACTACGG CATCCCGCGG GAGGCGGTGA TGGCGATCGG CGACGGTTAC AACGACCTGG ACATGGTGGC CTGGGCCGGG CTGGGCATAA TGATGGACAA CGCCCGGGAC GAGGTCAAAC GGTATGCGGA CCACGTCACG GCGTCCAACG ACGCGGACGG CGTGGCCGAG GCCATCGAAC GGTTCGTGCT CGGCAGGTAG
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Protein sequence | MPDYRLVAVD LDDTLLTSGL EVSPRAGRAI SRAQALGVVV TLATGRMYLS AVPFARRLGI DAPIITYQGA LVKHPVTGAE LLHRALANDT ARAVIERLRA YGYHLNVYLD DQLYMEVLTE LGKRYADLSR VEAHPVGDLL VYLGDRNPTK VLAIGGEDEI ERLEQEMIAL FPAERVHITR SKPKFLEFSH PLATKGRALQ YLAAYYGIPR EAVMAIGDGY NDLDMVAWAG LGIMMDNARD EVKRYADHVT ASNDADGVAE AIERFVLGR
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