| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0295 |
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| Symbol | |
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| ID | 6025600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 319518 |
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| End bp | 321362 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641593149 |
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| Product | excinuclease ABC, C subunit |
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| Protein accession | YP_001716488 |
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| Protein GI | 169830506 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGCCGG CGGAAAAAGT CAAACACTTC CCCGACAAAC CCGGGGTGTA CCTCTTCCGC
GGCGCGCGCG GCGAGGTGCT GTACGTTGGC AAGGCCGTAT CCCTCAAAAA CCGGGTGCGG
TCTTATTTCA CCGGGGCGCG GAGCGACAAG GTTCAAGCGC TGGTCGGCAA GACGCGGGAC
GTGGAGTGTC TGGTCACCGG ATCGGAAATC GAGGCCCTGA TCCTGGAGTC GAACCTGATT
AAGGAGCACC GGCCGCGCTA CAACGTGGTG CTCAAGGACG ACAAGAGCTA CCCGTACCTG
AAGGTGACCG TCCAGGAGGA GTACCCACGC ATCTTCCTGA CGCGCGCCCA GCCGCGCGAC
GGGGCCCGGT ACTTCGGCCC CTACCCGAGC GCAGCGGCGG TGCACGAGAC GGTGCGGCTC
CTGAAAAAAC TCTTCCCGCT CCGTTCCTGC CGCCAGACCC GCTTCAGACA GCAGCGCCCG
TGCCTGAACC ACCACATCGG GCGCTGCCTG GGCCCCTGTT CCGGCACGGT CGACCCCGAG
CGGTACCGGG CCATGGTGCA GGAGGTGCTG CTGTTCCTGG AAGGGCGGCA CGCCGACCTG
GTCCGCGGCC TGGCCCGGAA GATGGAGGCG GCCGCGGCGA ACCTGGAGTT CGAGCGGGCG
GCCGAACTGC GCGACCAGCT CCGGGCCGTC GAACAGGTGC TGGCCCGGCA GAGCATCGTG
TCCCCGGGAC GGGAGGATCG GGACGTGCTC GCGCTGGCCC GGGACGGAAA CCGGGGCCGC
GTGATTGTGC TGGAAATCAG GGACGGCAAG CTACTCGGGC GGCACAGCCT GGACCTGCAG
GGGATCGCGG AACGGTCGGA CGCCGAGGTG CTGGCCGCCT TTTTGAAGCA GTACTACCGG
GAGGCCGGTT TGATTCCGCC AGAGGTGCTG CTCCCTGTCC CGCTGGGCGA GGAACAAGGG
TTGATTGCCG AGTGGCTGGG ACTGCGCCGG CAGGGCCGCG TCCGGCTGCA CGTGCCCCGG
CGTGGGCGCA AGCGTGAACT GGTCCGCCTG GCCGAGCAAA ACGCCGCCGA GGCCCGGGCC
CAGATGGAAT TTGAGCGCGA CGCGGGGGAG GCCCTGGCCG AACTGGCCGC TGTCCTGGGG
CTGGACCAGG CCCCGGCCCG CCTGGAAGGG TATGACATTT CCAACCTCCA GGGCGCCCAG
ACGGTGGGCG TCATGGTCGT TTTCGAGGAC GGCCGCCCGG CCCCCGGCGA GTACCGGCAG
TTCCGGGTGC GGGAGACCGC CGGAACCCCG AACGATTTCG CCGCCATGCG CGAGGTGGTG
GCCCGCCGTT TCGCCCGGGC CCGGGAAGAG GGGAAACTGA TCGCCACGGG GCGGCTTTCG
TCTCGCGACG CCCGGTTCCA TCGCTTGCCC GACCTGGTGC TCGTCGATGG GGGCAAGGGT
CAGCTGAGCG CGGCCCTGGA AGGCCTGCGC GAAACCGGAT TCGAAGCCGT GCCCGTGTTT
GCCCTGACCA AGGAAGAGGA AAAGATCTTC GCCCCGGGCC GCAGTGACCC TGTGCCGGTG
CCCCCGGGTT CCCAGGCCCT GTTCCTCCTG CAGCACCTGC GCGACGAGGC CCACCGGTTC
GCCGTCGACA CCCACCGCCG GACCCGTTCC CGGGAAAGCC TGCGCTCTCT GCTGGAGGAG
ATCGACGGCA TTGGCCCGGC GCGGCGCCGC GCCCTGCAGA AAGCCTTCCC GTCCCTGGAC
GCCCTGAAGG GGGCGACACT GGCGGAACTG GCCGCCGTCC CGTCCATGAA CCGCAAGGCC
GCCCAGGCCG TGTACGACTA CTTCCAAGAC ACTCCCACTG AATAG
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| Protein sequence | MEPAEKVKHF PDKPGVYLFR GARGEVLYVG KAVSLKNRVR SYFTGARSDK VQALVGKTRD
VECLVTGSEI EALILESNLI KEHRPRYNVV LKDDKSYPYL KVTVQEEYPR IFLTRAQPRD
GARYFGPYPS AAAVHETVRL LKKLFPLRSC RQTRFRQQRP CLNHHIGRCL GPCSGTVDPE
RYRAMVQEVL LFLEGRHADL VRGLARKMEA AAANLEFERA AELRDQLRAV EQVLARQSIV
SPGREDRDVL ALARDGNRGR VIVLEIRDGK LLGRHSLDLQ GIAERSDAEV LAAFLKQYYR
EAGLIPPEVL LPVPLGEEQG LIAEWLGLRR QGRVRLHVPR RGRKRELVRL AEQNAAEARA
QMEFERDAGE ALAELAAVLG LDQAPARLEG YDISNLQGAQ TVGVMVVFED GRPAPGEYRQ
FRVRETAGTP NDFAAMREVV ARRFARAREE GKLIATGRLS SRDARFHRLP DLVLVDGGKG
QLSAALEGLR ETGFEAVPVF ALTKEEEKIF APGRSDPVPV PPGSQALFLL QHLRDEAHRF
AVDTHRRTRS RESLRSLLEE IDGIGPARRR ALQKAFPSLD ALKGATLAEL AAVPSMNRKA
AQAVYDYFQD TPTE
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