Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0293 |
Symbol | |
ID | 6027080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 314562 |
End bp | 316586 |
Gene Length | 2025 bp |
Protein Length | 674 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641593147 |
Product | excinuclease ABC subunit B |
Protein accession | YP_001716486 |
Protein GI | 169830504 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCCCTT TTAAACTCGT ATCCGACTAT GTGCCCCGGG GCGACCAGCC CCAGGCGATC GAAAACCTGG TCCGCGGCCT AGAAAGGGGC CTGCGGCACC AGGTGCTGCT GGGGGTGACC GGCTCCGGAA AGACCTATAC CATGGCCCAG GTGATCAGCA GGGTTCAGCG GCCGACCCTA GTGATTGCGC CGAACAAGAC TTTGGCCGCG CAGCTTTGCG CGGAGTTCAA GGAGTTTTTC CCCGAGAACG CGGTGGAGTA CTTCGTGAGT TACTACGACT ACTACCAGCC GGAGGCCTAC CTCCCGTCCT CGGACATGTA TATCGAGAAG GACGCCTCGA TCAACGAGGA GATCGACAAG CTCCGCCACT CGGCGACTTC GTCCCTGTTC GAGCGGCGGG ACGTGATCAT CGTGGCCTCG GTGTCCTGCA TCTACGGCCT GGGCGACCCG GAGGAATACC GGAACCTGGT CGTTTCCCTG CGCCGGAACG GCGGCTACGA CCGGGACGCG GTGCTCCGGA AGCTGGTAAG CATCCAGTAC GAACGGAACG ACATCAATTT CGGGCGCGGC CGGTTCCGGG TGCGTGGCGA CGTGCTGGAG GTCTTTCCGG CCGCCTCCGG GGAGCGGGCG CTCCGGATCG AGTTCTTCGG TGACGAGGTG GAGCGGATCC TGGAATTCGA CGCCCTGACC GGGGAAGTGC TGGGGGAACG GCAGCACGTC TCCATCCTGC CGGCCAGCCA CTACGCCACC TCCAAGGACC GGCTGGACAG GGCGGTCACG GCCATCGAAA CGGAACTGAC CGAGCGCCTG GCCGAACTCC GGGCGGCGAA CAAGCTTCTG GAGGCCCAGC GCCTGGAGCA GCGCACGAAC TACGACCTGG AAATGTTGCG GGAACTGGGT TACTGCAAGG GCATCGAGAA CTACTCCCGC CACCTGACCG GGCGGGAACC GGGAGCGCCG CCCTTTACCC TGCTCGACTA CTTCCCTGAC GACCTGCTGA TCATAGTGGA CGAGTCGCAC ATCACCATCC CCCAGATCGG AGGTATGTAC GAGGGCGACC GCTCACGCAA GGTGGCCTTG GTGGAACACG GTTTTAGGCT GCCGTCGGCC TTCGACAACC GGCCCCTGAC CTTCTCGGAG TTCATGGCCC GGGTCCGGCA GGGGGTGTAT GTTTCGGCTA CTCCCGGCCC ATGGGAACTG AAACACAGCG CGGCGGTAGT GGAACAGATC GTGCGCCCGA CGGGGCTGGT GGACCCGGAG ATGGTGGTCC GGCCCACCCG GGGCCAGATC GACGACCTCT TGGGCGAGAT CCGGCAACGG GTGGCGAGAA ACGAGCGGGT GCTGGTCACC ACCCTGACCA AACGGATGGC CGAGGACCTA TGCGACTACT TCCGGGAACT GGGCCTGAAG GTCCGGTACC TGCACTCGGA GATCAACACC CTGGAGCGGA TGGAGATCCT GCGCGACCTG CGCCTGGGGA CCTTTGACGT CCTGGTGGGG ATCAACCTGC TGCGGGAGGG GCTGGACCTG CCCGAGGTGA GCCTGGTGGC TGTTCTGGAC GCCGACAAGG AGGGGTACCT CCGGTCCGAG CGGTCCCTGA TCCAGACGGC GGGGCGGGCG GCCCGGAACC TGAACGGGAA AGTGATCCTG TACGCCGACC AGATCACCGG ATCCATGCGG CGCGCGCTGG ACGAGACCGA ACGGCGCCGT GAGCGTCAGA TGGCCTTCAA CCGGGCGCAC GGCATTACCC CGCAGACCGT GCAGAAGGCG GTGCGGAGCG TGATCGAGGC CACCCGGGCG GCCGAAACCC AAGCGCCCTA CTACGCGGTG AGCGAGAAAC GGCTGACCAG AAGCGAACTG AAGAAACTGA TCGCCAGGCT GGAGAAGGAC ATGCGGTACG CGGCCCGGCA TCTCGAGTTC GAGCGGGCGG CCCAGCTGCG CGACGCCCTG ATTGAACTCC GGCTGCAGCT TCAGCCCAAA GGCGTCCGCT CGCTCCGCCC GGCGGTCGGC GACGAACCGG AGTAG
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Protein sequence | MPPFKLVSDY VPRGDQPQAI ENLVRGLERG LRHQVLLGVT GSGKTYTMAQ VISRVQRPTL VIAPNKTLAA QLCAEFKEFF PENAVEYFVS YYDYYQPEAY LPSSDMYIEK DASINEEIDK LRHSATSSLF ERRDVIIVAS VSCIYGLGDP EEYRNLVVSL RRNGGYDRDA VLRKLVSIQY ERNDINFGRG RFRVRGDVLE VFPAASGERA LRIEFFGDEV ERILEFDALT GEVLGERQHV SILPASHYAT SKDRLDRAVT AIETELTERL AELRAANKLL EAQRLEQRTN YDLEMLRELG YCKGIENYSR HLTGREPGAP PFTLLDYFPD DLLIIVDESH ITIPQIGGMY EGDRSRKVAL VEHGFRLPSA FDNRPLTFSE FMARVRQGVY VSATPGPWEL KHSAAVVEQI VRPTGLVDPE MVVRPTRGQI DDLLGEIRQR VARNERVLVT TLTKRMAEDL CDYFRELGLK VRYLHSEINT LERMEILRDL RLGTFDVLVG INLLREGLDL PEVSLVAVLD ADKEGYLRSE RSLIQTAGRA ARNLNGKVIL YADQITGSMR RALDETERRR ERQMAFNRAH GITPQTVQKA VRSVIEATRA AETQAPYYAV SEKRLTRSEL KKLIARLEKD MRYAARHLEF ERAAQLRDAL IELRLQLQPK GVRSLRPAVG DEPE
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