Gene Daud_0256 details

Gene Information

• Locus tag: Daud_0256
• Symbol: smpB
• ID: 6025421
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: +
• Start bp: 273190
• End bp: 273651
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 641593110
• Product: SsrA-binding protein
• Protein accession: YP_001716449
• Protein GI: 169830467
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.00851918
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCCAGAG AACCCGAAAA AACAGTGTGC CAGAACCGCA AGGCCAGACA CGAATACTTC 
ATCCTGGAGA CCTACGAGGC CGGCTTGGTC CTGAAAGGCA CCGAGGTCAA ATCCCTGCGT 
GCCGGGAAGG CCAACCTGAA AGACAGCTTC GCGCGGATCC AGAACGGTGA GCTCTGGCTG 
GAGAACATGC ACGTCAGCCC GTACGAGCAG GGAAACCGGT TCAACCACGA GCCGAAGCGG 
CCCCGCAAGC TCCTGATGCA CAAGTCGGAG ATCATGCGAC TCTGGGGCAA GACCCGCGAA 
AAGGGCCTGG CGCTGATTCC GCTGCGGGTG TATTTCAAAG ACGGCCGGGC TAAGGTCGAA 
CTCGCCCTGG CCAAGGGCAA GAAACTCTAC GACAAGCGCG ACGACATCGC CAAGCGGGAG 
GCCGAGCGCG AGATTGCCCG GGCCGCCCGC GGCAAGGCCT AA 

 

Protein sequence

MAREPEKTVC QNRKARHEYF ILETYEAGLV LKGTEVKSLR AGKANLKDSF ARIQNGELWL 
ENMHVSPYEQ GNRFNHEPKR PRKLLMHKSE IMRLWGKTRE KGLALIPLRV YFKDGRAKVE 
LALAKGKKLY DKRDDIAKRE AEREIARAAR GKA