| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0255 |
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| Symbol | truA |
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| ID | 6026273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 272204 |
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| End bp | 272956 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641593109 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001716448 |
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| Protein GI | 169830466 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00104612 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGAATG TCCGGTTGAC TCTCGCTTAC GACGGCACGG CCTACCACGG CTTTCAAAAA
CAATCGGGTT CGGGCCTGCC GACCATTCAG GAAACACTGG AGCGCTGCCT GGCCGAACTT
TCGGGGGCGG CGCTCAAAGT GACAGGGGCC AGTCGCACCG ACGCCGGGGT CCACGCCAGG
GGCCAGGTGG TGAATTTCGT GACCGGTAGG TGGGGCATAC CCACCGAACG CATCCCGGCC
GCCCTCAACG GCGTCCTTCC CGGCGATATT GCCGCCTTGG ATGCCCGCGA GGTACCGGCT
GATTTTCATG CCCGTTACAG TGCGGTCGCC AAGACATATA GCTACACCCT GTACAACCAC
CCGGTCCGCT CCCCGTTCCA GCGGCTGTAC AGCCTGCACG TGCCCAGGGC CCTAGACCTC
AGGGCCATGC GGCTCGCCGC CCGGCACCTG ATGGGGCGGC ACGACTTCAG TACCTTTCAG
GCTGCCGGTC GGCCGGTCCA GTCGGCGGTG CGCACGCTGA CCCGGGCCGA TATCGAGGCC
CAAGCGCCTC TGGTACGGCT GGTGTTCCGT GCCGACGGTT TCCTGTACAA CATGGTGCGG
ATCATGGCCG GCACCCTGCT GGAGGTTGGC CTCGAGCGGC TCGACCCGGA AGCCTTGCCG
GACATCATCG CGTCCGGGGA CCGCGCCCGT GCCGGCCCCA CGGTTCCTCC CCACGGACTG
TGCCTGGAAG AAGTGGAATA CGACTCAACC TGA
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| Protein sequence | MPNVRLTLAY DGTAYHGFQK QSGSGLPTIQ ETLERCLAEL SGAALKVTGA SRTDAGVHAR
GQVVNFVTGR WGIPTERIPA ALNGVLPGDI AALDAREVPA DFHARYSAVA KTYSYTLYNH
PVRSPFQRLY SLHVPRALDL RAMRLAARHL MGRHDFSTFQ AAGRPVQSAV RTLTRADIEA
QAPLVRLVFR ADGFLYNMVR IMAGTLLEVG LERLDPEALP DIIASGDRAR AGPTVPPHGL
CLEEVEYDST
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