Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0253 |
Symbol | |
ID | 6026831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 270880 |
End bp | 271827 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641593107 |
Product | DNA-directed RNA polymerase, alpha subunit |
Protein accession | YP_001716446 |
Protein GI | 169830464 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000117405 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGAAA TAGAAAAACC GAAGATCGAG TGCGTTGAGA TGGATCCGGA GGGCACGTAC GGGAAGTTCG TCGTCGACCC TCTGGAAAGG GGCTACGGTA TTACGCTGGG TAATTCGCTC CGGCGCGTGC TTTTAGCCTC GCTGCCCGGG GCGGCGGTCA CCGCCGTCAA GATCGACGGG GTGCTGCACG AGTTTTCAAG TATTCCCGGC GTGCGTGAAG ACGTCACCGA GCTGATCCTA AACCTGAAAA GCCTGCGTCT GAAGCTCTAC GGCGAAGAGG ATCGGTTGAT GCGGATCGAG GCGGAAGGCG AGGGCCGGAT CACCGCCGGC GACATCATCA CCAGTCCGGA TGTGGAGATC CTGAATCCGG ACCTGCATAT CGCCACGCTG GAGCCCGACG CACGATTGTA TATGGAATTG ACGGTGGGCC GGGGACGGGG TTACGTTCCG GCGGAGAAAA ACAAGCGCGG CAACCACGTG ATCGGCGTGA TTCCCGTCGA CTCCATCTTT ACGCCGGTGA CCAAGGTGAA CTTTACGGTG GACAAAACGC GGGTGGGCCA CGACACCGAC TTTGACAAAC TAACTATGGA GGTCTGGACC GACGGCAGCC TGCGCCCGGA CGAGGCGTTG AGCTTGGCCG CGCGGATCAC CACGGAACAC CTGCGGCTGT TCGTGGGTCT CACCGAATCG GTGAACAACG TCGAGATCAT GGTGACGAAA GAAGAAGAGA AAAAGAACAA GCTTTTGGAA ATGCCCATCG AAGAACTCGA TCTTTCCGTA CGTTCGTACA ACTGTCTGAA ACGGGCCGGG ATCAACACGG TGGAAGAACT CATCCAGCGC AACGAGGAAG AAATGATGAA GGTGCGCAAC CTGGGCAAGA AGTCGCTGGA GGAAGTAGTG CGCAAGCTGG GTGAACTCGG CCTCGACCTG CGGCATGACG AGGAATAG
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Protein sequence | MLEIEKPKIE CVEMDPEGTY GKFVVDPLER GYGITLGNSL RRVLLASLPG AAVTAVKIDG VLHEFSSIPG VREDVTELIL NLKSLRLKLY GEEDRLMRIE AEGEGRITAG DIITSPDVEI LNPDLHIATL EPDARLYMEL TVGRGRGYVP AEKNKRGNHV IGVIPVDSIF TPVTKVNFTV DKTRVGHDTD FDKLTMEVWT DGSLRPDEAL SLAARITTEH LRLFVGLTES VNNVEIMVTK EEEKKNKLLE MPIEELDLSV RSYNCLKRAG INTVEELIQR NEEEMMKVRN LGKKSLEEVV RKLGELGLDL RHDEE
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