Gene Daud_0232 details

Gene Information

• Locus tag: Daud_0232
• Symbol: rplP
• ID: 6027155
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: +
• Start bp: 261466
• End bp: 261897
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 641593086
• Product: 50S ribosomal protein L16
• Protein accession: YP_001716425
• Protein GI: 169830443
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0197] Ribosomal protein L16/L10E
• TIGRFAM ID: [TIGR01164] ribosomal protein L16, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGACGC CCAAGAGGGT TAAATGGAGA AGACAACACC GGCCCGATCG AGCCGGAAAG 
GCCAAGGGCG GCACCAAAAT ACAGTTCGGC GACCTGGCCT TGCAGTCACT CGATGTCGCC 
TGGATATCGA GCCGGCAGAT CGAGGCGGCC CGTATTGCGA TGACCCGTCA CGTAAAGCGC 
GGCGGCAAAG TCTGGATCCG CATCTTCCCG GACCGGCCGA TCACGGCCAA ACCGGCGGAA 
ACCCGCATGG GCTCCGGCAA GGGCTCGCCG GAATACTGGG TTGCCGTGGT GAAGCCGGGA 
CGGATCATGT TTGAAATCGC CGGAGTGCCG GAGGAAACGG CGCGCGAGGC TTTGCGTCTT 
GCTTCTCATA AACTGCCCTG CAGAACGAAA ATTGTGAAAC GCCAGGAAGT GGGTGAGGCC 
GGTGAAGGTT AA 

 

Protein sequence

MLTPKRVKWR RQHRPDRAGK AKGGTKIQFG DLALQSLDVA WISSRQIEAA RIAMTRHVKR 
GGKVWIRIFP DRPITAKPAE TRMGSGKGSP EYWVAVVKPG RIMFEIAGVP EETAREALRL 
ASHKLPCRTK IVKRQEVGEA GEG