| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0217 |
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| Symbol | |
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| ID | 6027352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 247379 |
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| End bp | 250843 |
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| Gene Length | 3465 bp |
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| Protein Length | 1154 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641593071 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_001716410 |
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| Protein GI | 169830428 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGGATC TTACCAATTT CGATCGGATC AGAATCGGGC TGGCTTCTGC GGACCACATC
ACCACCTGGT CCCACGGCGA AGTTAAAAAG CCGGAGACTA TCAACTACCG GACCCTGAAA
CCGGAACGCG ACGGGCTGTT TTGCGAGCGG ATCTTCGGGC CGACCCGGGA CTGGGAGTGC
TACTGCGGTA AGTATAAAAG GGTACGTTAC AAAGGCATAG TCTGCGACCG CTGCGGTGTC
GAGGTCACCC GTTCCAAGGT ACGCCGGGAA CGGCTGGGGC ACATCAAACT GGCCGCGCCG
GTATCCCACA TCTGGTATTT CAAAGGAATC CCGTCCCGGA TGGGGTTGTT GCTGGATATG
TCCCCGCGGG CCCTGGAAAA GGTGCTGTAC TTCGTCTCGT ACATTGTCAC CAACCCCGGG
GATACGCCGC TTTTCAAGAA ACAACTGCTG ACCGAGCAGG AATACCGGGA GTTCCGCGAC
AAGTACGGCA CGGATTTTCA GGCCGCAATG GGCGCGGAGG CGATTCTTCA GCTTCTGGAC
GAGATCGACC TGAACGAGCT GGCCGCCGAA TTGAGGCAGG AGATCCGGGA CGTGACCGGC
CAGCGCCGCA TCCGGGCGAT CCGCCGGCTG GAGGTGGTCG AATCCTTCCG CAAGTCCCAG
AACAGCCCGT CCTGGATGAT CATGCAGGTG CTGCCGGTCA TCCCGCCGGA ACTAAGGCCG
ATGGTACAGC TCGACGGGGG GCGTTTCGCC ACCTCGGACT TAAACGACCT GTACCGGCGC
GTGATTAACC GGAACAATCG GCTCAAACGC TTGCTCGAAC TGGGCGCTCC GGACATCATC
GTCCGCAACG AAAAGCGCAT GCTCCAGGAG GCGGTCGACG CCCTGATCGA CAATGGGAGG
CGGGGCCGGC CGGTGACTGG GCCGGGGAAC CGTCCGCTGA AGTCGTTGAG CGACATGCTC
AAAGGAAAGC AGGGGCGCTT CCGGCAGAAC CTCTTGGGCA AGCGGGTCGA CTACTCGGGC
CGTTCGGTGA TCGTGGTCGG CCCGTCGTTA AAGCTGCACC AGTGCGGCCT GCCGAAGGAG
ATGGCGCTCG AGCTTTTTAA GCCGTTTGTG ATGAAACGCC TGGTCGGCGA CGGCCACGCC
CACAACATCA AAAGCGCCAA GCGCAAGGTG GAGCGGGTGC GGCCGGAGGT CTGGGACGTG
CTGGAGGACG TGATCAAGGA ACACCCGGTG CTTTTGAACC GGGCGCCCAC CCTGCACCGC
CTGGGGATCC AAGCCTTTGA GCCGGTGCTG GTCGAGGGCC GGGCCATTCA GATCCACCCG
CTGGTGTGCA CGGCCTATAA CGCCGACTTC GACGGGGACC AGATGGCGGT GCACGTGCCG
CTTTCGGCGG AGGCCCAGGC CGAAGCCCGG CTCCTGATGC TGTCCACCTA CAACATCCTG
AACCCGAAGG ACGGCCGACC GGTGACCATC CCCACCCAGG ACATGGTGCT CGGGATTTAC
TACCTGACCA TCGAGCGCCC AGGGGCCCGG GGTGAGGGGA AGGCTTTTCG CGACGTCAAC
GAGGCCATCC TGGCCTACGA ATCGGGTGTG ATCGAACTGC ACGCGCTGGT GAAGGTTAAC
ATGGGTGATG GCCGGCTTCT GGAGACCACC GTGGGGCGGC TGATCTTCAA CGAGGCCATG
CCGCCGGAAA TCAGCTACAT CAACAAGCTG GTGGACAAGA AGGAACTGAG CCTCATCGTC
GACCGGTGCT ACCGCCGCCT GGGGTACAAG CGGACCGCCG AGCTTCTGGA CGGCATCAAA
CAGCTTGGTT TCAAGTACGC CACCCAGGGC GGGCTGACCA TCGGGATGAA CGATATTGTG
ATCCCGGAAC GGAAAAAGGA GATTCTGGGC GAAGCCGAGA GCCACGTGGA AATGATCGAG
GATCAATACC GGCGCGGTCT GATCACCTTT GACGAGAAGT ACCGCCAGAC CATCGAGACC
TGGAACCGGG CTACGGAACT GGTGACCCAG GAACTCTTGA ACACCCTGGA CCGGTTCAAC
CCGGTGTACA TGATGGCCAC CTCGGGCGCC CGGGGTAACA TTCAGCAGAT CCGGCAGCTG
GCGGGCCTGC GCGGCCTGAT GGCCGACCCT TCGGGGCGGA TCATCGACCT GCCGATCAAG
GCGAACTTCC GGGAAGGGCT CTCGGTGCTC GAGTACTTCA TCTCCACCCA CGGCGCGCGC
AAGGGCCTGG CGGACACCGC GCTCCGGACC GCCGACTCGG GGTACCTGAC CCGGAGGCTG
GTGGACGTGG CTCAGGACGT GATTGTGCGG GAAATAGACT GCGGCACCGA CGAGTATGTC
GAGGTCGGAG ACGTGCGGGA CGGCACGGAA ATCATCGAGA TGCTCCAGGA CCGGATTGTG
GGCCGCACCG CGGCGCGCGC AATCGTCCAC CCGGAAACGG GGGCCGTAAT CGTCGACGCC
GATGAGGAAA TCCTGGAGGA GGCGGCGGAA AAGATTGTGG CCGCCGGGAT CAAGAAGGTG
GCGATCCGCT CGGTGTTCAC CTGCAAGACC CGGCACGGGG TGTGCAAGAA GTGCTACGGT
CGCAATTTGG CGACCGGCCG GGTTGTGGAC ATCGGTGAGG CCATCGGCAT CATTGCCGCC
CAGTCCATCG GCGAACCCGG CACCCAGTTA ACCATGCGCA CTTTCCACAC CGGCGGCGTG
GCCGGGGAAG ACATCACCCA GGGTCTGCCG CGTGTGGAGG AGCTTTTCGA GGCCCGGCGT
CCCAAGGGGC AGGCCATCGT GGCCGAGATC GACGGGCTGG TCGAAGTCCG TGAGGTAAAG
GGCCGGCGGG AGATTGAAAT CCGGGGCGAG AACGGCGAGC GCGTTCAGTA CGCCATCCCA
TTCGGCGCCC GCTTGAAAGT TCAGAACGGG GACCGCGTCG AGGCCGGGGA CGAACTGTCC
GAGGGCTCGG TCAACCCGCA TGATCTCTTG AAGATTAAGG GCCCGGCGGC GGTCCAGCAG
TACCTCCTGC GCGAGGTCCA GCGGGTGTAC CGGATGCAGG GCGTGGACAT CAACGACAAG
CACATCGAGG TCGTGATCCG CCAGATGCTG CGCAAAGTGA AGATCGACGA ACCGGGCGAC
ACCGAATTCC TGCCCGGCAG CCTGGTTGAC ATCCTCGACC TGGAGGAAGA GAACCGGCGC
GTGGAGGCGG CCGGTGGCAG CCCGGCCACG AGCAAGTCTG TGCTGCTCGG CATCACCAAG
GCCTCACTGG CCACGGACTC GTTTCTGTCG GCGGCCTCCT TCCAGGAAAC CACGCGGGTA
TTGACGGAGG CGGCCATCAA GGGCAAGGTG GACCCGCTCC TCGGCTTGAA GGAAAACGTG
ATCATCGGTA AGCTGATTCC GGCCGGTACC GGGATGAACC GCTACCGGAG TGTCGAGGTC
GATCCGGCGG TGGAAACCCC GGCCAAAGAA GTCCCGACCC ACTAA
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| Protein sequence | MLDLTNFDRI RIGLASADHI TTWSHGEVKK PETINYRTLK PERDGLFCER IFGPTRDWEC
YCGKYKRVRY KGIVCDRCGV EVTRSKVRRE RLGHIKLAAP VSHIWYFKGI PSRMGLLLDM
SPRALEKVLY FVSYIVTNPG DTPLFKKQLL TEQEYREFRD KYGTDFQAAM GAEAILQLLD
EIDLNELAAE LRQEIRDVTG QRRIRAIRRL EVVESFRKSQ NSPSWMIMQV LPVIPPELRP
MVQLDGGRFA TSDLNDLYRR VINRNNRLKR LLELGAPDII VRNEKRMLQE AVDALIDNGR
RGRPVTGPGN RPLKSLSDML KGKQGRFRQN LLGKRVDYSG RSVIVVGPSL KLHQCGLPKE
MALELFKPFV MKRLVGDGHA HNIKSAKRKV ERVRPEVWDV LEDVIKEHPV LLNRAPTLHR
LGIQAFEPVL VEGRAIQIHP LVCTAYNADF DGDQMAVHVP LSAEAQAEAR LLMLSTYNIL
NPKDGRPVTI PTQDMVLGIY YLTIERPGAR GEGKAFRDVN EAILAYESGV IELHALVKVN
MGDGRLLETT VGRLIFNEAM PPEISYINKL VDKKELSLIV DRCYRRLGYK RTAELLDGIK
QLGFKYATQG GLTIGMNDIV IPERKKEILG EAESHVEMIE DQYRRGLITF DEKYRQTIET
WNRATELVTQ ELLNTLDRFN PVYMMATSGA RGNIQQIRQL AGLRGLMADP SGRIIDLPIK
ANFREGLSVL EYFISTHGAR KGLADTALRT ADSGYLTRRL VDVAQDVIVR EIDCGTDEYV
EVGDVRDGTE IIEMLQDRIV GRTAARAIVH PETGAVIVDA DEEILEEAAE KIVAAGIKKV
AIRSVFTCKT RHGVCKKCYG RNLATGRVVD IGEAIGIIAA QSIGEPGTQL TMRTFHTGGV
AGEDITQGLP RVEELFEARR PKGQAIVAEI DGLVEVREVK GRREIEIRGE NGERVQYAIP
FGARLKVQNG DRVEAGDELS EGSVNPHDLL KIKGPAAVQQ YLLREVQRVY RMQGVDINDK
HIEVVIRQML RKVKIDEPGD TEFLPGSLVD ILDLEEENRR VEAAGGSPAT SKSVLLGITK
ASLATDSFLS AASFQETTRV LTEAAIKGKV DPLLGLKENV IIGKLIPAGT GMNRYRSVEV
DPAVETPAKE VPTH
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