Gene Daud_0210 details

Gene Information

• Locus tag: Daud_0210
• ID: 6027469
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: +
• Start bp: 238776
• End bp: 239312
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 641593064
• Product: NusG antitermination factor
• Protein accession: YP_001716403
• Protein GI: 169830421
• COG category: [K] Transcription
• COG ID: [COG0250] Transcription antiterminator
• TIGRFAM ID: [TIGR00922] transcription termination/antitermination factor NusG

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000666853
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCAAAC AGTGGTTTGT AGTCCATACC TATTCCGGTT ATGAAAACAA GGTGAAAGCC 
AACCTGGAAA AGCGGATCGA GTCGATGAGT ATGGAAGACA AGATCTTCCG TATCGTTGTG 
CCCGTGGAGG ACGAAATCGA AGTCAAGGGC GGCAAGCGCA AGATCTCCAA GCGCAAGATT 
TTCCCCGGCT ACGTGATGGT GGAGATGATT CTGGACGACG ACTCTTACCG CGTGGTGCGC 
AATACCCCCG GAGTCACCGG TTTTGTGGGC AGTGTCGGGA TCGGCTCCAA ACCCATTCCC 
CTGACCGACG CCGAAGCGAA CCAGATCATC AGCCAGATGG AAGGCGACGA ACCGCGTATC 
CGCATCGACC TGGTTCCCGG GGAGAAGGTG CGCGTGATGG CCGGGCCGTT TGAGAACTTC 
ATCGGCACGG TGGATGACGT GAACTACGAA AAGGCCAAAA TCCGGGTGAT GATTTCGATG 
TTTGGACGGG AGACCCCCAT CGAACTTGAA TACTTCCAGA TTGAAAAAGT CACCTAG 

 

Protein sequence

MSKQWFVVHT YSGYENKVKA NLEKRIESMS MEDKIFRIVV PVEDEIEVKG GKRKISKRKI 
FPGYVMVEMI LDDDSYRVVR NTPGVTGFVG SVGIGSKPIP LTDAEANQII SQMEGDEPRI 
RIDLVPGEKV RVMAGPFENF IGTVDDVNYE KAKIRVMISM FGRETPIELE YFQIEKVT